Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.32■□□□□ 0.36
NDE1Q9NXR1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDE1Q9NXR1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 NIFKP9-201ENST00000419265 221 ntBASIC17.31■□□□□ 0.36
NDE1Q9NXR1 TSPY6P-201ENST00000448518 926 ntBASIC17.31■□□□□ 0.36
NDE1Q9NXR1 AL162430.1-201ENST00000480705 870 ntBASIC17.31■□□□□ 0.36
NDE1Q9NXR1 DUTP2-201ENST00000519164 463 ntBASIC17.31■□□□□ 0.36
NDE1Q9NXR1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.31■□□□□ 0.36
NDE1Q9NXR1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 AL023284.2-201ENST00000405850 579 ntBASIC17.3■□□□□ 0.36
NDE1Q9NXR1 GUSBP6-202ENST00000438529 1198 ntBASIC17.3■□□□□ 0.36
NDE1Q9NXR1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 AGGF1P2-201ENST00000426656 2106 ntBASIC17.3■□□□□ 0.36
NDE1Q9NXR1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.3■□□□□ 0.36
NDE1Q9NXR1 AC008741.2-201ENST00000612792 3115 ntBASIC17.3■□□□□ 0.36
NDE1Q9NXR1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.29■□□□□ 0.36
NDE1Q9NXR1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 AC009065.1-201ENST00000564055 1225 ntBASIC17.29■□□□□ 0.36
NDE1Q9NXR1 AL138781.1-201ENST00000566567 1274 ntBASIC17.29■□□□□ 0.36
NDE1Q9NXR1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.29■□□□□ 0.36
NDE1Q9NXR1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms