Protein–RNA interactions for Protein: Q9NW08

POLR3B, DNA-directed RNA polymerase III subunit RPC2, humanhuman

Predicted RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3BQ9NW08 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
POLR3BQ9NW08 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR3BQ9NW08 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR3BQ9NW08 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
POLR3BQ9NW08 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR3BQ9NW08 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR3BQ9NW08 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 AL024508.2-201ENST00000607749 1894 ntBASIC18.35■□□□□ 0.53
POLR3BQ9NW08 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR3BQ9NW08 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 GMCL1P1-201ENST00000463439 1581 ntBASIC18.34■□□□□ 0.53
POLR3BQ9NW08 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.34■□□□□ 0.53
POLR3BQ9NW08 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR3BQ9NW08 LINC00602-201ENST00000629776 2065 ntBASIC18.34■□□□□ 0.53
POLR3BQ9NW08 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
POLR3BQ9NW08 AC135776.1-201ENST00000319817 2481 ntBASIC18.33■□□□□ 0.53
POLR3BQ9NW08 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR3BQ9NW08 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
POLR3BQ9NW08 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR3BQ9NW08 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
POLR3BQ9NW08 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR3BQ9NW08 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR3BQ9NW08 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR3BQ9NW08 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 MIR1233-2-201ENST00000408138 82 ntBASIC18.33■□□□□ 0.52
POLR3BQ9NW08 MIR1233-1-201ENST00000408722 82 ntBASIC18.33■□□□□ 0.52
POLR3BQ9NW08 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 AC093909.1-201ENST00000504731 1122 ntBASIC18.33■□□□□ 0.52
POLR3BQ9NW08 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 ABALON-201ENST00000629058 1903 ntBASIC18.33■□□□□ 0.52
POLR3BQ9NW08 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR3BQ9NW08 AC138932.1-201ENST00000534164 6830 ntBASIC18.33■□□□□ 0.52
POLR3BQ9NW08 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms