Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 NSUN5P1-202ENST00000421140 1535 ntBASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 NSUN5P2-203ENST00000457352 1529 ntBASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 AC007967.3-201ENST00000434308 558 ntBASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 AC074051.2-201ENST00000565115 352 ntBASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ECHDC1Q9NTX5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 AC012615.1-201ENST00000565797 1299 ntBASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ECHDC1Q9NTX5 REXO1L11P-201ENST00000620964 1927 ntBASIC21.7■■□□□ 1.07
ECHDC1Q9NTX5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
ECHDC1Q9NTX5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.7■■□□□ 1.07
ECHDC1Q9NTX5 BX276092.7-203ENST00000637198 1536 ntBASIC21.7■■□□□ 1.07
ECHDC1Q9NTX5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 COX5BP2-201ENST00000392354 334 ntBASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 HCG4P8-203ENST00000443049 980 ntBASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ECHDC1Q9NTX5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms