Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 NSUN5P2-203ENST00000457352 1529 ntBASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 AC079781.3-201ENST00000449110 356 ntBASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 LINC00602-201ENST00000629776 2065 ntBASIC18.69■□□□□ 0.58
ARHGEF4Q9NR80 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 MINOS1P3-201ENST00000457048 203 ntBASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 AC009078.2-202ENST00000463353 338 ntBASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 AL160237.2-201ENST00000556165 472 ntBASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 AP005901.3-202ENST00000581653 237 ntBASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF4Q9NR80 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 AC091607.1-201ENST00000490318 1060 ntBASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 AC104692.2-201ENST00000603054 253 ntBASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 AL353801.3-201ENST00000609898 542 ntBASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
ARHGEF4Q9NR80 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms