Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 TSPY15P-201ENST00000457163 923 ntBASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 AC008550.1-201ENST00000511500 884 ntBASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC52A3Q9NQ40 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 SLC25A1P3-201ENST00000395415 828 ntBASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 UBALD1-205ENST00000590891 2641 ntBASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 FLJ38576-201ENST00000623820 2459 ntBASIC16.86■□□□□ 0.29
SLC52A3Q9NQ40 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 AC128688.1-201ENST00000487626 519 ntBASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms