Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 KRT18P65-201ENST00000439811 1286 ntBASIC15.26■□□□□ 0.03
GCM1Q9NP62 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 AC009154.2-201ENST00000621177 724 ntBASIC15.26■□□□□ 0.03
GCM1Q9NP62 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GCM1Q9NP62 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 REXO1L9P-201ENST00000604264 2108 ntBASIC15.25■□□□□ 0.03
GCM1Q9NP62 KRT18P1-202ENST00000452408 1331 ntBASIC15.25■□□□□ 0.03
GCM1Q9NP62 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 ATP5G2P1-201ENST00000433580 426 ntBASIC15.25■□□□□ 0.03
GCM1Q9NP62 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 NPAP1P7-201ENST00000613027 823 ntBASIC15.25■□□□□ 0.03
GCM1Q9NP62 AC124864.1-201ENST00000623408 392 ntBASIC15.25■□□□□ 0.03
GCM1Q9NP62 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GCM1Q9NP62 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GCM1Q9NP62 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.24■□□□□ 0.03
GCM1Q9NP62 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GCM1Q9NP62 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.24■□□□□ 0.03
GCM1Q9NP62 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.24■□□□□ 0.03
GCM1Q9NP62 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
GCM1Q9NP62 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GCM1Q9NP62 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GCM1Q9NP62 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.24■□□□□ 0.03
GCM1Q9NP62 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.24■□□□□ 0.03
GCM1Q9NP62 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GCM1Q9NP62 AP002383.4-201ENST00000442518 975 ntBASIC15.24■□□□□ 0.03
GCM1Q9NP62 RN7SL606P-201ENST00000472779 293 ntBASIC15.24■□□□□ 0.03
GCM1Q9NP62 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.24■□□□□ 0.03
GCM1Q9NP62 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.24■□□□□ 0.03
GCM1Q9NP62 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.24■□□□□ 0.03
GCM1Q9NP62 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.24■□□□□ 0.03
GCM1Q9NP62 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.24■□□□□ 0.03
GCM1Q9NP62 AP002414.4-201ENST00000589764 1148 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms