Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 GPR32P1-201ENST00000601788 811 ntBASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 AL353692.3-201ENST00000407031 1396 ntBASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC40Q9H9A6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 VENTXP5-201ENST00000523979 775 ntBASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 KRT8P47-201ENST00000604727 1398 ntBASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC40Q9H9A6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 AC009949.1-201ENST00000623048 1830 ntBASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 RCN1P1-201ENST00000400413 996 ntBASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 DDX43P3-201ENST00000441064 443 ntBASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 AC022616.7-201ENST00000525383 220 ntBASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 LINC01238-205ENST00000567549 1107 ntBASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 RN7SL850P-201ENST00000579959 291 ntBASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 AL355312.1-201ENST00000407115 2176 ntBASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC40Q9H9A6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LRRC40Q9H9A6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC40Q9H9A6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRC40Q9H9A6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC40Q9H9A6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LRRC40Q9H9A6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC40Q9H9A6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms