Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 AC096633.1-201ENST00000422446 749 ntBASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 DUTP2-201ENST00000519164 463 ntBASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 FAM215A-202ENST00000632077 792 ntBASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.04■□□□□ 0.8
BCAS3Q9H6U6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 AC004817.3-201ENST00000602957 2129 ntBASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 AF186996.4-201ENST00000467186 377 ntBASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 NKAPP1-205ENST00000585790 367 ntBASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 AP000867.4-201ENST00000641616 219 ntBASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
BCAS3Q9H6U6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 AC012640.2-201ENST00000561606 901 ntBASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS3Q9H6U6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
BCAS3Q9H6U6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.02■□□□□ 0.79
BCAS3Q9H6U6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.02■□□□□ 0.79
BCAS3Q9H6U6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
BCAS3Q9H6U6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.02■□□□□ 0.79
BCAS3Q9H6U6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.02■□□□□ 0.79
BCAS3Q9H6U6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
BCAS3Q9H6U6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 RPS2P1-201ENST00000434010 821 ntBASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS3Q9H6U6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BCAS3Q9H6U6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20■□□□□ 0.79
BCAS3Q9H6U6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20■□□□□ 0.79
BCAS3Q9H6U6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BCAS3Q9H6U6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms