Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.7■□□□□ 0.1
SLIRPQ9GZT3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.7■□□□□ 0.1
SLIRPQ9GZT3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLIRPQ9GZT3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.7■□□□□ 0.1
SLIRPQ9GZT3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.7■□□□□ 0.1
SLIRPQ9GZT3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SLIRPQ9GZT3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLIRPQ9GZT3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.7■□□□□ 0.1
SLIRPQ9GZT3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLIRPQ9GZT3 AC046185.3-201ENST00000623228 1824 ntBASIC15.7■□□□□ 0.1
SLIRPQ9GZT3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.7■□□□□ 0.1
SLIRPQ9GZT3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLIRPQ9GZT3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLIRPQ9GZT3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLIRPQ9GZT3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLIRPQ9GZT3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 AC132938.6-201ENST00000623828 1655 ntBASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLIRPQ9GZT3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLIRPQ9GZT3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms