Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 GRAMD4P1-201ENST00000435181 1110 ntBASIC10.67□□□□□ -0.7
LIMD2Q9BT23 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 SNORA78-201ENST00000459373 127 ntBASIC10.67□□□□□ -0.7
LIMD2Q9BT23 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 FDX2-206ENST00000492239 773 ntTSL 2 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 FITM1-202ENST00000559294 800 ntBASIC10.67□□□□□ -0.7
LIMD2Q9BT23 AL353719.1-201ENST00000566847 864 ntBASIC10.67□□□□□ -0.7
LIMD2Q9BT23 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 AL354751.1-201ENST00000412768 1863 ntBASIC10.67□□□□□ -0.7
LIMD2Q9BT23 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 AC018695.7-201ENST00000624587 2492 ntBASIC10.66□□□□□ -0.7
LIMD2Q9BT23 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 AC036111.1-201ENST00000533973 1582 ntBASIC10.66□□□□□ -0.7
LIMD2Q9BT23 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 TSPY7P-201ENST00000431358 1114 ntBASIC10.66□□□□□ -0.7
LIMD2Q9BT23 KRT18P23-201ENST00000435622 1283 ntBASIC10.66□□□□□ -0.7
LIMD2Q9BT23 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 NAPSB-206ENST00000562112 1266 ntBASIC10.66□□□□□ -0.7
LIMD2Q9BT23 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 AP000525.1-201ENST00000608286 694 ntBASIC10.66□□□□□ -0.7
LIMD2Q9BT23 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 HOXB1-202ENST00000577092 1414 ntBASIC10.66□□□□□ -0.7
LIMD2Q9BT23 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LIMD2Q9BT23 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms