Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLF1Q9BQI6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLF1Q9BQI6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLF1Q9BQI6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLF1Q9BQI6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
SLF1Q9BQI6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.72■□□□□ 0.91
SLF1Q9BQI6 IL9RP2-201ENST00000423948 1312 ntBASIC20.72■□□□□ 0.91
SLF1Q9BQI6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.72■□□□□ 0.91
SLF1Q9BQI6 PHGDH-209ENST00000641074 1780 ntBASIC20.72■□□□□ 0.91
SLF1Q9BQI6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.72■□□□□ 0.91
SLF1Q9BQI6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 AC093010.1-201ENST00000473625 1624 ntBASIC20.71■□□□□ 0.91
SLF1Q9BQI6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 AL133373.2-201ENST00000623187 2828 ntBASIC20.71■□□□□ 0.91
SLF1Q9BQI6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLF1Q9BQI6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SLF1Q9BQI6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
SLF1Q9BQI6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 AC093909.1-201ENST00000504731 1122 ntBASIC20.7■□□□□ 0.9
SLF1Q9BQI6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.7■□□□□ 0.9
SLF1Q9BQI6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 FAM220CP-201ENST00000395253 831 ntBASIC20.69■□□□□ 0.9
SLF1Q9BQI6 AC007967.3-201ENST00000434308 558 ntBASIC20.69■□□□□ 0.9
SLF1Q9BQI6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 MIR7706-201ENST00000613747 67 ntBASIC20.69■□□□□ 0.9
SLF1Q9BQI6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms