Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH3Q96II8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH3Q96II8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.24■□□□□ 0.67
LRCH3Q96II8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
LRCH3Q96II8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH3Q96II8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH3Q96II8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH3Q96II8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH3Q96II8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 AC074386.1-202ENST00000463561 864 ntBASIC19.23■□□□□ 0.67
LRCH3Q96II8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH3Q96II8 BX323043.1-201ENST00000641006 1765 ntBASIC19.23■□□□□ 0.67
LRCH3Q96II8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH3Q96II8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH3Q96II8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.23■□□□□ 0.67
LRCH3Q96II8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH3Q96II8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH3Q96II8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH3Q96II8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH3Q96II8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.22■□□□□ 0.67
LRCH3Q96II8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.22■□□□□ 0.67
LRCH3Q96II8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH3Q96II8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.22■□□□□ 0.67
LRCH3Q96II8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH3Q96II8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.22■□□□□ 0.67
LRCH3Q96II8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH3Q96II8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH3Q96II8 FAM207CP-201ENST00000443486 507 ntBASIC19.22■□□□□ 0.67
LRCH3Q96II8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LRCH3Q96II8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH3Q96II8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.22■□□□□ 0.67
LRCH3Q96II8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH3Q96II8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.22■□□□□ 0.67
LRCH3Q96II8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH3Q96II8 AC005332.7-201ENST00000614046 2005 ntBASIC19.22■□□□□ 0.67
LRCH3Q96II8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH3Q96II8 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.22■□□□□ 0.67
LRCH3Q96II8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH3Q96II8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH3Q96II8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH3Q96II8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 ARSEP1-201ENST00000420443 635 ntBASIC19.21■□□□□ 0.67
LRCH3Q96II8 SLC25A6P5-201ENST00000435663 894 ntBASIC19.21■□□□□ 0.67
LRCH3Q96II8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 CRB3P1-201ENST00000449338 276 ntBASIC19.21■□□□□ 0.67
LRCH3Q96II8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH3Q96II8 IGHV3-65-201ENST00000523210 341 ntBASIC19.21■□□□□ 0.67
LRCH3Q96II8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH3Q96II8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 AC025580.3-201ENST00000617932 1424 ntBASIC19.21■□□□□ 0.67
LRCH3Q96II8 AC073592.4-201ENST00000623827 446 ntBASIC19.21■□□□□ 0.67
LRCH3Q96II8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH3Q96II8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH3Q96II8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.21■□□□□ 0.67
LRCH3Q96II8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH3Q96II8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
LRCH3Q96II8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 AL163051.1-201ENST00000569214 1512 ntBASIC19.2■□□□□ 0.66
LRCH3Q96II8 AC093484.2-201ENST00000580996 2166 ntBASIC19.2■□□□□ 0.66
LRCH3Q96II8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH3Q96II8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH3Q96II8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH3Q96II8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 AC004408.2-201ENST00000623613 2777 ntBASIC19.2■□□□□ 0.66
LRCH3Q96II8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH3Q96II8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH3Q96II8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 NME2P1-201ENST00000426182 414 ntBASIC19.2■□□□□ 0.66
LRCH3Q96II8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms