Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 AC005915.1-201ENST00000624912 2018 ntBASIC13□□□□□ -0.33
CHCHD1Q96BP2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 RCC2P3-201ENST00000418112 1537 ntBASIC13□□□□□ -0.33
CHCHD1Q96BP2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 AC106739.1-201ENST00000617035 715 ntBASIC13□□□□□ -0.33
CHCHD1Q96BP2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 AC099063.4-201ENST00000641099 1602 ntBASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 AC016396.2-201ENST00000562575 1417 ntBASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 LINC01451-201ENST00000623792 534 ntBASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 AL136967.2-201ENST00000623968 743 ntBASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 AL035685.1-201ENST00000636663 812 ntBASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHCHD1Q96BP2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 AC123595.1-201ENST00000440769 1046 ntBASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHCHD1Q96BP2 AC005181.1-201ENST00000604782 1256 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms