Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 AL049597.2-201ENST00000565575 961 ntBASIC17.46■□□□□ 0.39
ATL1Q8WXF7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 AC005332.3-201ENST00000589904 676 ntBASIC17.46■□□□□ 0.39
ATL1Q8WXF7 AC083849.1-201ENST00000615227 514 ntBASIC17.46■□□□□ 0.39
ATL1Q8WXF7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATL1Q8WXF7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATL1Q8WXF7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATL1Q8WXF7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.46■□□□□ 0.38
ATL1Q8WXF7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATL1Q8WXF7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 AC134043.2-201ENST00000624206 2238 ntBASIC17.44■□□□□ 0.38
ATL1Q8WXF7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 AL645929.1-201ENST00000420084 975 ntBASIC17.44■□□□□ 0.38
ATL1Q8WXF7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 AL390719.2-201ENST00000606993 987 ntBASIC17.44■□□□□ 0.38
ATL1Q8WXF7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATL1Q8WXF7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms