Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 AC021087.4-201ENST00000563761 564 ntBASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 AL356309.3-201ENST00000624132 1934 ntBASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SH3RF2Q8TEC5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 KRT8P47-201ENST00000604727 1398 ntBASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 AC018470.1-201ENST00000624790 3129 ntBASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 AL671883.3-201ENST00000603274 991 ntBASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SH3RF2Q8TEC5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 AC139887.3-201ENST00000568585 713 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms