Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 AL121672.3-201ENST00000608644 468 ntBASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 AC009154.2-201ENST00000621177 724 ntBASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 AC132938.6-201ENST00000623828 1655 ntBASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 AC106820.2-201ENST00000563775 3264 ntBASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 LINC00602-201ENST00000629776 2065 ntBASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 AP001094.4-201ENST00000579008 2176 ntBASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 AC084018.2-201ENST00000613093 2607 ntBASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLL1Q8TB92 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 BX276092.5-203ENST00000456199 560 ntBASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 AC090616.6-201ENST00000582640 721 ntBASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.48■□□□□ 0.39
HMGCLL1Q8TB92 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLL1Q8TB92 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLL1Q8TB92 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.47■□□□□ 0.39
HMGCLL1Q8TB92 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLL1Q8TB92 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HMGCLL1Q8TB92 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLL1Q8TB92 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms