Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 C1S-221ENST00000617865 2844 ntTSL 5 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 AC093426.1-201ENST00000561926 3011 ntBASIC11.11□□□□□ -0.63
SVIPQ8NHG7 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 OS9-202ENST00000315970 2691 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 AC008806.1-201ENST00000624962 2443 ntBASIC11.11□□□□□ -0.63
SVIPQ8NHG7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 CEP89-207ENST00000591863 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 AC244015.2-201ENST00000616358 1861 ntBASIC11.1□□□□□ -0.63
SVIPQ8NHG7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 REXO1L1P-202ENST00000608646 1974 ntBASIC11.1□□□□□ -0.63
SVIPQ8NHG7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 THRAP3-203ENST00000469141 3339 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 CASP3-206ENST00000523916 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 AC097359.2-201ENST00000604992 2389 ntBASIC11.1□□□□□ -0.63
SVIPQ8NHG7 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 STAC2-201ENST00000333461 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
SVIPQ8NHG7 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 EPHB1-211ENST00000493838 2786 ntTSL 2 BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 ALDH3B2-204ENST00000530069 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 ITIH1-211ENST00000537050 2493 ntTSL 2 BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SVIPQ8NHG7 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms