Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AP005901.3-202ENST00000581653 237 ntBASIC18.97■□□□□ 0.63
TTC39CQ8N584 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.97■□□□□ 0.63
TTC39CQ8N584 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.97■□□□□ 0.63
TTC39CQ8N584 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39CQ8N584 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39CQ8N584 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.97■□□□□ 0.63
TTC39CQ8N584 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.97■□□□□ 0.63
TTC39CQ8N584 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39CQ8N584 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39CQ8N584 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39CQ8N584 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39CQ8N584 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39CQ8N584 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39CQ8N584 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39CQ8N584 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39CQ8N584 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39CQ8N584 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TTC39CQ8N584 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.96■□□□□ 0.63
TTC39CQ8N584 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.96■□□□□ 0.63
TTC39CQ8N584 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TTC39CQ8N584 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.96■□□□□ 0.63
TTC39CQ8N584 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39CQ8N584 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TTC39CQ8N584 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.96■□□□□ 0.63
TTC39CQ8N584 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.96■□□□□ 0.63
TTC39CQ8N584 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.96■□□□□ 0.63
TTC39CQ8N584 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39CQ8N584 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39CQ8N584 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39CQ8N584 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.96■□□□□ 0.63
TTC39CQ8N584 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
TTC39CQ8N584 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39CQ8N584 GNAS-203ENST00000306120 1878 ntBASIC18.95■□□□□ 0.62
TTC39CQ8N584 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39CQ8N584 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39CQ8N584 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39CQ8N584 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39CQ8N584 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39CQ8N584 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 AC007967.3-201ENST00000434308 558 ntBASIC18.95■□□□□ 0.62
TTC39CQ8N584 NUS1P1-201ENST00000446295 882 ntBASIC18.95■□□□□ 0.62
TTC39CQ8N584 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39CQ8N584 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 MIR3652-201ENST00000579335 131 ntBASIC18.95■□□□□ 0.62
TTC39CQ8N584 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 AC011467.2-201ENST00000598425 242 ntBASIC18.95■□□□□ 0.62
TTC39CQ8N584 LINC01451-201ENST00000623792 534 ntBASIC18.95■□□□□ 0.62
TTC39CQ8N584 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39CQ8N584 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39CQ8N584 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39CQ8N584 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39CQ8N584 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39CQ8N584 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39CQ8N584 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.95■□□□□ 0.62
TTC39CQ8N584 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC39CQ8N584 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 AC103564.2-201ENST00000432853 1299 ntBASIC18.94■□□□□ 0.62
TTC39CQ8N584 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 AC091607.1-201ENST00000490318 1060 ntBASIC18.94■□□□□ 0.62
TTC39CQ8N584 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TTC39CQ8N584 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC39CQ8N584 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms