Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 HNRNPDP1-201ENST00000439535 754 ntBASIC18.15■□□□□ 0.5
CHPFQ8IZ52 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 AC117500.6-201ENST00000624871 588 ntBASIC18.15■□□□□ 0.5
CHPFQ8IZ52 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 AC104581.1-202ENST00000635932 2618 ntBASIC18.15■□□□□ 0.5
CHPFQ8IZ52 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHPFQ8IZ52 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CHPFQ8IZ52 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHPFQ8IZ52 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.14■□□□□ 0.5
CHPFQ8IZ52 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.5
CHPFQ8IZ52 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.14■□□□□ 0.49
CHPFQ8IZ52 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 AL356309.3-201ENST00000624132 1934 ntBASIC18.14■□□□□ 0.49
CHPFQ8IZ52 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 SART3-203ENST00000546611 1184 ntBASIC18.14■□□□□ 0.49
CHPFQ8IZ52 AC021087.4-201ENST00000563761 564 ntBASIC18.14■□□□□ 0.49
CHPFQ8IZ52 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 AC006538.3-201ENST00000612495 578 ntBASIC18.14■□□□□ 0.49
CHPFQ8IZ52 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.14■□□□□ 0.49
CHPFQ8IZ52 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 FAM220CP-201ENST00000395253 831 ntBASIC18.13■□□□□ 0.49
CHPFQ8IZ52 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 RPL13AP23-201ENST00000480739 586 ntBASIC18.13■□□□□ 0.49
CHPFQ8IZ52 KRT18P58-201ENST00000527480 1120 ntBASIC18.13■□□□□ 0.49
CHPFQ8IZ52 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CHPFQ8IZ52 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CHPFQ8IZ52 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHPFQ8IZ52 HTR7P1-202ENST00000624664 4411 ntBASIC18.12■□□□□ 0.49
CHPFQ8IZ52 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHPFQ8IZ52 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHPFQ8IZ52 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms