Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 AC246785.2-201ENST00000432512 513 ntBASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 AC124864.1-201ENST00000623408 392 ntBASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 AC016734.2-201ENST00000624325 1377 ntBASIC19.32■□□□□ 0.68
ZC3H3Q8IXZ2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 AL139327.4-201ENST00000612362 153 ntBASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H3Q8IXZ2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 AC091607.1-201ENST00000490318 1060 ntBASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 AC122714.2-201ENST00000502787 707 ntBASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H3Q8IXZ2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 AC087388.1-201ENST00000571370 1112 ntBASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 AP005901.3-202ENST00000581653 237 ntBASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ZC3H3Q8IXZ2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms