Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 MKNK2P1-201ENST00000437526 628 ntBASIC20.58■□□□□ 0.89
OTOP1Q7RTM1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.58■□□□□ 0.89
OTOP1Q7RTM1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.58■□□□□ 0.89
OTOP1Q7RTM1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.58■□□□□ 0.89
OTOP1Q7RTM1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.58■□□□□ 0.89
OTOP1Q7RTM1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.58■□□□□ 0.89
OTOP1Q7RTM1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
OTOP1Q7RTM1 AL078644.1-201ENST00000609881 752 ntBASIC20.58■□□□□ 0.89
OTOP1Q7RTM1 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
OTOP1Q7RTM1 AC093028.1-201ENST00000622998 982 ntBASIC20.58■□□□□ 0.89
OTOP1Q7RTM1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
OTOP1Q7RTM1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
OTOP1Q7RTM1 ELL2P1-201ENST00000413990 1906 ntBASIC20.58■□□□□ 0.88
OTOP1Q7RTM1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.58■□□□□ 0.88
OTOP1Q7RTM1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
OTOP1Q7RTM1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.58■□□□□ 0.88
OTOP1Q7RTM1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
OTOP1Q7RTM1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.58■□□□□ 0.88
OTOP1Q7RTM1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.58■□□□□ 0.88
OTOP1Q7RTM1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.58■□□□□ 0.88
OTOP1Q7RTM1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 BX005266.1-201ENST00000473402 457 ntBASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 AC006557.2-201ENST00000592985 1240 ntBASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
OTOP1Q7RTM1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 CEND1P1-201ENST00000451006 455 ntBASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
OTOP1Q7RTM1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 AC092474.2-201ENST00000424288 719 ntBASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
OTOP1Q7RTM1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms