Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 PRKDC-204ENST00000521331 1087 ntTSL 215.4■□□□□ 0.064e-7■□□□□ 8.9
SND1Q7KZF4 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.054e-7■□□□□ 8.9
SND1Q7KZF4 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC14.37□□□□□ -0.114e-7■□□□□ 8.9
SND1Q7KZF4 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC14.13□□□□□ -0.154e-7■□□□□ 8.9
SND1Q7KZF4 EIF3K-210ENST00000591409 583 ntTSL 313.65□□□□□ -0.224e-7■□□□□ 8.9
SND1Q7KZF4 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC12.43□□□□□ -0.424e-12■□□□□ 8.9
SND1Q7KZF4 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC12.37□□□□□ -0.434e-7■□□□□ 8.9
SND1Q7KZF4 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC11.49□□□□□ -0.574e-7■□□□□ 8.9
SND1Q7KZF4 RPL31-201ENST00000264258 1865 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.624e-7■□□□□ 8.9
SND1Q7KZF4 EIF3K-214ENST00000614624 780 ntTSL 1 (best) BASIC11.13□□□□□ -0.634e-7■□□□□ 8.9
SND1Q7KZF4 DDB1-202ENST00000414411 1904 ntTSL 210.51□□□□□ -0.734e-7■□□□□ 8.9
SND1Q7KZF4 EIF3K-208ENST00000588934 501 ntTSL 3 BASIC10.41□□□□□ -0.744e-7■□□□□ 8.9
SND1Q7KZF4 RPL31-210ENST00000441435 717 ntTSL 210.19□□□□□ -0.784e-7■□□□□ 8.9
SND1Q7KZF4 EIF3K-201ENST00000248342 864 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.84e-7■□□□□ 8.9
SND1Q7KZF4 EIF3K-211ENST00000592558 670 ntTSL 2 BASIC9.86□□□□□ -0.834e-7■□□□□ 8.9
SND1Q7KZF4 PRKDC-208ENST00000536710 554 ntTSL 49.35□□□□□ -0.914e-7■□□□□ 8.9
SND1Q7KZF4 EIF3K-209ENST00000590134 711 ntTSL 29.08□□□□□ -0.964e-7■□□□□ 8.9
SND1Q7KZF4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC8.46□□□□□ -1.064e-7■□□□□ 8.9
SND1Q7KZF4 RPL31-209ENST00000419276 781 ntTSL 58.38□□□□□ -1.074e-7■□□□□ 8.9
SND1Q7KZF4 RPL31-211ENST00000456292 357 ntTSL 28.38□□□□□ -1.074e-7■□□□□ 8.9
SND1Q7KZF4 PMPCB-207ENST00000469560 1615 ntTSL 27.81□□□□□ -1.164e-7■□□□□ 8.9
SND1Q7KZF4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.95□□□□□ -1.34e-7■□□□□ 8.9
SND1Q7KZF4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.664e-7■□□□□ 8.9
SND1Q7KZF4 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.72□□□□□ -0.216e-18■□□□□ 8.9
SND1Q7KZF4 ATG9A-208ENST00000429920 733 ntTSL 512.09□□□□□ -0.473e-9■□□□□ 8.9
SND1Q7KZF4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.9■□□□□ 0.942e-6■□□□□ 8.9
SND1Q7KZF4 SDHC-206ENST00000470743 832 ntTSL 59.62□□□□□ -0.872e-6■□□□□ 8.9
SND1Q7KZF4 SDHC-208ENST00000513009 369 ntTSL 1 (best) BASIC8.59□□□□□ -1.032e-6■□□□□ 8.9
SND1Q7KZF4 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.42□□□□□ -1.222e-6■□□□□ 8.9
SND1Q7KZF4 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.97□□□□□ -1.292e-6■□□□□ 8.9
SND1Q7KZF4 SDHC-207ENST00000504963 571 ntTSL 46.9□□□□□ -1.32e-6■□□□□ 8.9
SND1Q7KZF4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.52e-6■□□□□ 8.9
SND1Q7KZF4 ITIH3-207ENST00000467268 568 ntTSL 414.06□□□□□ -0.164e-12■□□□□ 8.9
SND1Q7KZF4 ACSL3-203ENST00000407441 538 ntTSL 38.15□□□□□ -1.16e-8■□□□□ 8.9
SND1Q7KZF4 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.4□□□□□ -1.233e-8■□□□□ 8.9
SND1Q7KZF4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.513e-8■□□□□ 8.9
SND1Q7KZF4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.59■■□□□ 1.059e-7■□□□□ 8.9
SND1Q7KZF4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.889e-7■□□□□ 8.9
SND1Q7KZF4 SLC12A4-203ENST00000537830 3525 ntTSL 2 BASIC12.88□□□□□ -0.359e-7■□□□□ 8.9
SND1Q7KZF4 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC12.85□□□□□ -0.359e-7■□□□□ 8.9
SND1Q7KZF4 SLC12A4-204ENST00000541864 3627 ntTSL 2 BASIC12.79□□□□□ -0.369e-7■□□□□ 8.9
SND1Q7KZF4 SLC12A4-219ENST00000576616 3768 ntTSL 2 BASIC12.3□□□□□ -0.449e-7■□□□□ 8.9
SND1Q7KZF4 SLC12A4-206ENST00000570802 3761 ntTSL 212.01□□□□□ -0.499e-7■□□□□ 8.9
SND1Q7KZF4 SLC6A8-210ENST00000485324 2401 ntTSL 222.32■■□□□ 1.161e-18■□□□□ 8.8
SND1Q7KZF4 SLC6A8-202ENST00000413787 468 ntTSL 518.55■□□□□ 0.561e-18■□□□□ 8.8
SND1Q7KZF4 SLC6A8-206ENST00000457723 266 ntTSL 512.8□□□□□ -0.361e-18■□□□□ 8.8
SND1Q7KZF4 SLC6A8-205ENST00000442457 523 ntTSL 312.57□□□□□ -0.41e-18■□□□□ 8.8
SND1Q7KZF4 SLC6A8-208ENST00000467402 308 ntTSL 512.28□□□□□ -0.441e-18■□□□□ 8.8
SND1Q7KZF4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.7■■■□□ 2.025e-7■□□□□ 8.8
SND1Q7KZF4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.855e-7■□□□□ 8.8
SND1Q7KZF4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.99■■□□□ 1.755e-7■□□□□ 8.8
SND1Q7KZF4 ZDHHC24-204ENST00000534073 1615 ntTSL 324.69■■□□□ 1.545e-7■□□□□ 8.8
SND1Q7KZF4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.62■□□□□ 0.895e-7■□□□□ 8.8
SND1Q7KZF4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.525e-7■□□□□ 8.8
SND1Q7KZF4 TRAP1-213ENST00000575707 785 ntTSL 517.02■□□□□ 0.325e-7■□□□□ 8.8
SND1Q7KZF4 TRAP1-210ENST00000574494 547 ntTSL 214.65□□□□□ -0.065e-7■□□□□ 8.8
SND1Q7KZF4 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.485e-7■□□□□ 8.8
SND1Q7KZF4 GAPDHP35-201ENST00000513369 976 ntBASIC9.16□□□□□ -0.945e-7■□□□□ 8.8
SND1Q7KZF4 PTGS1-204ENST00000426608 468 ntTSL 513.7□□□□□ -0.224e-6■□□□□ 8.8
SND1Q7KZF4 HSPA9-206ENST00000506477 664 ntTSL 217.45■□□□□ 0.383e-11■□□□□ 8.8
SND1Q7KZF4 HSPA9-205ENST00000505110 518 ntTSL 415.34■□□□□ 0.053e-11■□□□□ 8.8
SND1Q7KZF4 HSPA9-203ENST00000504810 584 ntTSL 311.07□□□□□ -0.643e-11■□□□□ 8.8
SND1Q7KZF4 HSPA9-208ENST00000507115 663 ntTSL 310.12□□□□□ -0.793e-11■□□□□ 8.8
SND1Q7KZF4 HSPA9-209ENST00000507886 551 ntTSL 39.9□□□□□ -0.823e-11■□□□□ 8.8
SND1Q7KZF4 PKM-221ENST00000568743 580 ntTSL 1 (best)10.5□□□□□ -0.736e-14■□□□□ 8.8
SND1Q7KZF4 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.137e-51■□□□□ 8.8
SND1Q7KZF4 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 07e-51■□□□□ 8.8
SND1Q7KZF4 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.017e-51■□□□□ 8.8
SND1Q7KZF4 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.097e-51■□□□□ 8.8
SND1Q7KZF4 PRAME-209ENST00000439106 891 ntAPPRIS ALT2 TSL 314.24□□□□□ -0.137e-51■□□□□ 8.8
SND1Q7KZF4 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.137e-51■□□□□ 8.8
SND1Q7KZF4 PRAME-213ENST00000492657 2831 ntTSL 1 (best)14.01□□□□□ -0.177e-51■□□□□ 8.8
SND1Q7KZF4 PRAME-211ENST00000476336 589 ntTSL 213.86□□□□□ -0.197e-51■□□□□ 8.8
SND1Q7KZF4 PRAME-207ENST00000420709 705 ntAPPRIS ALT2 TSL 213.25□□□□□ -0.297e-51■□□□□ 8.8
SND1Q7KZF4 PRAME-208ENST00000438888 566 ntAPPRIS ALT2 TSL 412.75□□□□□ -0.377e-51■□□□□ 8.8
SND1Q7KZF4 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.186e-16■□□□□ 8.8
SND1Q7KZF4 SLC25A5-203ENST00000463551 433 ntTSL 26.74□□□□□ -1.336e-16■□□□□ 8.8
SND1Q7KZF4 FGFR4-213ENST00000511076 838 ntTSL 520.29■□□□□ 0.842e-6■□□□□ 8.8
SND1Q7KZF4 SND1-210ENST00000483503 603 ntTSL 512.7□□□□□ -0.387e-12■□□□□ 8.8
SND1Q7KZF4 SND1-215ENST00000492772 549 ntTSL 411.42□□□□□ -0.587e-12■□□□□ 8.8
SND1Q7KZF4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.01■□□□□ 0.311e-14■□□□□ 8.8
SND1Q7KZF4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.391e-18■□□□□ 8.8
SND1Q7KZF4 PA2G4-206ENST00000552766 1085 ntTSL 5 BASIC12.08□□□□□ -0.481e-18■□□□□ 8.8
SND1Q7KZF4 PA2G4-204ENST00000552266 779 ntTSL 27.51□□□□□ -1.211e-18■□□□□ 8.8
SND1Q7KZF4 ATP5B-205ENST00000548647 682 ntTSL 516.41■□□□□ 0.224e-13■□□□□ 8.8
SND1Q7KZF4 LIMD1-AS1-202ENST00000429798 955 ntTSL 1 (best)10.74□□□□□ -0.691e-323■□□□□ 8.8
SND1Q7KZF4 KRTCAP2-206ENST00000487350 785 ntTSL 1 (best)22.44■■□□□ 1.189e-10■□□□□ 8.8
SND1Q7KZF4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.389e-10■□□□□ 8.8
SND1Q7KZF4 KRTCAP2-205ENST00000482246 414 ntTSL 316.19■□□□□ 0.189e-10■□□□□ 8.8
SND1Q7KZF4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.089e-10■□□□□ 8.8
SND1Q7KZF4 KRTCAP2-207ENST00000490672 3264 ntTSL 213.66□□□□□ -0.229e-10■□□□□ 8.8
SND1Q7KZF4 KRTCAP2-204ENST00000471891 578 ntTSL 313.04□□□□□ -0.329e-10■□□□□ 8.8
SND1Q7KZF4 KRTCAP2-209ENST00000492892 430 ntTSL 312.08□□□□□ -0.489e-10■□□□□ 8.8
SND1Q7KZF4 KRTCAP2-210ENST00000497317 477 ntTSL 312.07□□□□□ -0.489e-10■□□□□ 8.8
SND1Q7KZF4 KRTCAP2-208ENST00000491084 598 ntTSL 311.09□□□□□ -0.639e-10■□□□□ 8.8
SND1Q7KZF4 KRTCAP2-203ENST00000463527 463 ntTSL 35.77□□□□□ -1.499e-10■□□□□ 8.8
SND1Q7KZF4 KRTCAP2-202ENST00000461136 271 ntTSL 34.41□□□□□ -1.79e-10■□□□□ 8.8
SND1Q7KZF4 FLNB-205ENST00000466455 404 ntTSL 318.42■□□□□ 0.549e-8■□□□□ 8.8
SND1Q7KZF4 FLNB-207ENST00000470231 315 ntTSL 1 (best)14.72□□□□□ -0.059e-8■□□□□ 8.8
SND1Q7KZF4 DAG1-207ENST00000431960 549 ntTSL 413.17□□□□□ -0.39e-8■□□□□ 8.8
Retrieved 100 of 13,567 protein–RNA pairs in 276 ms