Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SHISA5-218ENST00000497863 972 ntTSL 213.9□□□□□ -0.181e-7■□□□□ 10.5
LARP4Q71RC2 SHISA5-211ENST00000460758 1297 ntTSL 1 (best)11.95□□□□□ -0.51e-7■□□□□ 10.5
LARP4Q71RC2 MRPL43-212ENST00000487059 810 ntTSL 217.95■□□□□ 0.462e-6■□□□□ 10.4
LARP4Q71RC2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.212e-6■□□□□ 10.4
LARP4Q71RC2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.36■□□□□ 0.212e-6■□□□□ 10.4
LARP4Q71RC2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.22■□□□□ 0.192e-6■□□□□ 10.4
LARP4Q71RC2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.17■□□□□ 0.182e-6■□□□□ 10.4
LARP4Q71RC2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.71□□□□□ -0.052e-6■□□□□ 10.4
LARP4Q71RC2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.232e-6■□□□□ 10.4
LARP4Q71RC2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.64□□□□□ -0.232e-6■□□□□ 10.4
LARP4Q71RC2 MRPL43-209ENST00000448244 727 ntTSL 513.64□□□□□ -0.232e-6■□□□□ 10.4
LARP4Q71RC2 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC12.68□□□□□ -0.382e-6■□□□□ 10.4
LARP4Q71RC2 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC12.3□□□□□ -0.442e-6■□□□□ 10.4
LARP4Q71RC2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.784e-22■□□□□ 10.4
LARP4Q71RC2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.424e-22■□□□□ 10.4
LARP4Q71RC2 B2M-203ENST00000557901 407 ntTSL 1 (best)7.26□□□□□ -1.252e-9■□□□□ 10.4
LARP4Q71RC2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.41■■□□□ 1.341e-7■□□□□ 10.4
LARP4Q71RC2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.131e-7■□□□□ 10.4
LARP4Q71RC2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.6■□□□□ 0.251e-7■□□□□ 10.4
LARP4Q71RC2 GOLGA4-204ENST00000429018 2036 ntTSL 1 (best)15.46■□□□□ 0.073e-7■□□□□ 10.4
LARP4Q71RC2 COX4I1-212ENST00000566617 572 ntTSL 426.15■■□□□ 1.783e-8■□□□□ 10.4
LARP4Q71RC2 EIF1-204ENST00000469308 815 ntTSL 220.7■□□□□ 0.93e-11■□□□□ 10.4
LARP4Q71RC2 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.82□□□□□ -1.323e-11■□□□□ 10.4
LARP4Q71RC2 RPL8-204ENST00000526668 717 ntTSL 1 (best)14.82□□□□□ -0.047e-11■□□□□ 10.4
LARP4Q71RC2 RPL8-211ENST00000531975 698 ntTSL 311.11□□□□□ -0.637e-11■□□□□ 10.4
LARP4Q71RC2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.71■□□□□ 0.592e-7■□□□□ 10.4
LARP4Q71RC2 NEU4-215ENST00000488997 541 ntTSL 420.28■□□□□ 0.842e-6■□□□□ 10.4
LARP4Q71RC2 NEU4-212ENST00000435894 484 ntTSL 419.91■□□□□ 0.782e-6■□□□□ 10.4
LARP4Q71RC2 NEU4-214ENST00000476542 536 ntTSL 219.91■□□□□ 0.782e-6■□□□□ 10.4
LARP4Q71RC2 RPL8-206ENST00000528296 540 ntTSL 315.74■□□□□ 0.117e-11■□□□□ 10.4
LARP4Q71RC2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.21■□□□□ 0.353e-8■□□□□ 10.4
LARP4Q71RC2 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.123e-8■□□□□ 10.4
LARP4Q71RC2 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.213e-8■□□□□ 10.4
LARP4Q71RC2 AFP-206ENST00000514279 693 ntTSL 25.58□□□□□ -1.521e-323■□□□□ 10.4
LARP4Q71RC2 EIF1-202ENST00000462917 2170 ntTSL 1 (best)18.39■□□□□ 0.533e-12■□□□□ 10.4
LARP4Q71RC2 EIF1-201ENST00000310837 1120 ntTSL 1 (best)8.08□□□□□ -1.123e-12■□□□□ 10.4
LARP4Q71RC2 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.363e-12■□□□□ 10.4
LARP4Q71RC2 EIF1-205ENST00000482111 1428 ntTSL 25.86□□□□□ -1.473e-12■□□□□ 10.4
LARP4Q71RC2 RPL34-207ENST00000506397 549 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.665e-23■□□□□ 10.4
LARP4Q71RC2 RPL34-205ENST00000503574 2627 ntTSL 29.12□□□□□ -0.955e-23■□□□□ 10.4
LARP4Q71RC2 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.545e-23■□□□□ 10.4
LARP4Q71RC2 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.331e-9■□□□□ 10.4
LARP4Q71RC2 ACTR1A-201ENST00000369905 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.471e-9■□□□□ 10.4
LARP4Q71RC2 ACTR1A-205ENST00000487599 2726 ntTSL 5 BASIC11.5□□□□□ -0.571e-9■□□□□ 10.4
LARP4Q71RC2 ACTR1A-207ENST00000636707 1046 ntTSL 510.63□□□□□ -0.711e-9■□□□□ 10.4
LARP4Q71RC2 ACTR1A-202ENST00000470322 3519 ntTSL 29.24□□□□□ -0.931e-9■□□□□ 10.4
LARP4Q71RC2 ACTR1A-206ENST00000494549 520 ntTSL 27.92□□□□□ -1.141e-9■□□□□ 10.4
LARP4Q71RC2 RPL35A-207ENST00000474640 687 ntTSL 26.62□□□□□ -1.351e-8■□□□□ 10.4
LARP4Q71RC2 MAPK3-213ENST00000485579 739 ntTSL 216.85■□□□□ 0.297e-7■□□□□ 10.4
LARP4Q71RC2 LAMP1-202ENST00000471046 424 ntTSL 311.38□□□□□ -0.594e-9■□□□□ 10.4
LARP4Q71RC2 H2AFZ-202ENST00000511203 1880 ntTSL 228.98■■■□□ 2.232e-11■□□□□ 10.4
LARP4Q71RC2 H2AFZ-203ENST00000511319 1254 ntTSL 1 (best)26.51■■□□□ 1.832e-11■□□□□ 10.4
LARP4Q71RC2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.012e-11■□□□□ 10.4
LARP4Q71RC2 H2AFZ-204ENST00000511348 1843 ntTSL 1 (best)13.31□□□□□ -0.282e-11■□□□□ 10.4
LARP4Q71RC2 H2AFZ-206ENST00000529158 726 ntTSL 39.02□□□□□ -0.972e-11■□□□□ 10.4
LARP4Q71RC2 ALB-211ENST00000505649 1509 ntTSL 55.92□□□□□ -1.461e-323■□□□□ 10.4
LARP4Q71RC2 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.15□□□□□ -1.581e-323■□□□□ 10.4
LARP4Q71RC2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.026e-8■□□□□ 10.4
LARP4Q71RC2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.2■□□□□ 0.666e-8■□□□□ 10.4
LARP4Q71RC2 BRI3-202ENST00000456357 667 ntTSL 216.21■□□□□ 0.196e-8■□□□□ 10.4
LARP4Q71RC2 BRI3-203ENST00000473967 819 ntTSL 514.16□□□□□ -0.146e-8■□□□□ 10.4
LARP4Q71RC2 BRI3-206ENST00000491463 567 ntTSL 49.73□□□□□ -0.856e-8■□□□□ 10.4
LARP4Q71RC2 CHCHD5-205ENST00000489052 554 ntTSL 314.48□□□□□ -0.093e-6■□□□□ 10.4
LARP4Q71RC2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.647e-8■□□□□ 10.4
LARP4Q71RC2 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.73□□□□□ -0.377e-8■□□□□ 10.4
LARP4Q71RC2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.333e-11■□□□□ 10.4
LARP4Q71RC2 LYPLA2-210ENST00000495365 842 ntTSL 215.07■□□□□ 03e-11■□□□□ 10.4
LARP4Q71RC2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.32□□□□□ -0.123e-11■□□□□ 10.4
LARP4Q71RC2 LYPLA2-208ENST00000472213 822 ntTSL 313.62□□□□□ -0.233e-11■□□□□ 10.4
LARP4Q71RC2 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC12.68□□□□□ -0.383e-11■□□□□ 10.4
LARP4Q71RC2 TP53-219ENST00000610538 2580 ntTSL 1 (best) BASIC12.04□□□□□ -0.483e-11■□□□□ 10.4
LARP4Q71RC2 TP53-206ENST00000455263 2580 ntTSL 1 (best) BASIC12.04□□□□□ -0.483e-11■□□□□ 10.4
LARP4Q71RC2 TP53-227ENST00000622645 2653 ntTSL 1 (best) BASIC11.96□□□□□ -0.53e-11■□□□□ 10.4
LARP4Q71RC2 TP53-204ENST00000420246 2653 ntTSL 1 (best) BASIC11.96□□□□□ -0.53e-11■□□□□ 10.4
LARP4Q71RC2 TP53-218ENST00000610292 2639 ntTSL 1 (best) BASIC11.91□□□□□ -0.53e-11■□□□□ 10.4
LARP4Q71RC2 TP53-220ENST00000610623 2331 ntTSL 1 (best) BASIC11.89□□□□□ -0.513e-11■□□□□ 10.4
LARP4Q71RC2 TP53-208ENST00000504290 2331 ntTSL 1 (best) BASIC11.89□□□□□ -0.513e-11■□□□□ 10.4
LARP4Q71RC2 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC11.47□□□□□ -0.573e-11■□□□□ 10.4
LARP4Q71RC2 TP53-228ENST00000635293 1883 ntTSL 511.42□□□□□ -0.583e-11■□□□□ 10.4
LARP4Q71RC2 TP53-222ENST00000617185 2724 ntTSL 1 (best) BASIC11.34□□□□□ -0.593e-11■□□□□ 10.4
LARP4Q71RC2 TP53-213ENST00000510385 2404 ntTSL 1 (best) BASIC11.2□□□□□ -0.623e-11■□□□□ 10.4
LARP4Q71RC2 TP53-223ENST00000618944 2404 ntTSL 1 (best) BASIC11.2□□□□□ -0.623e-11■□□□□ 10.4
LARP4Q71RC2 TP53-201ENST00000269305 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.643e-11■□□□□ 10.4
LARP4Q71RC2 TP53-226ENST00000620739 2579 ntTSL 1 (best) BASIC11.05□□□□□ -0.643e-11■□□□□ 10.4
LARP4Q71RC2 TP53-202ENST00000359597 1152 ntTSL 1 (best) BASIC10.98□□□□□ -0.653e-11■□□□□ 10.4
LARP4Q71RC2 TP53-209ENST00000504937 2271 ntTSL 1 (best) BASIC10.86□□□□□ -0.673e-11■□□□□ 10.4
LARP4Q71RC2 TP53-224ENST00000619186 2271 ntTSL 1 (best) BASIC10.86□□□□□ -0.673e-11■□□□□ 10.4
LARP4Q71RC2 CTSC-201ENST00000227266 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.713e-7■□□□□ 10.4
LARP4Q71RC2 TP53-205ENST00000445888 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.763e-11■□□□□ 10.4
LARP4Q71RC2 TP53-225ENST00000619485 2506 ntTSL 1 (best) BASIC10.33□□□□□ -0.763e-11■□□□□ 10.4
LARP4Q71RC2 TP53-203ENST00000413465 1018 ntTSL 1 (best) BASIC10.07□□□□□ -0.83e-11■□□□□ 10.4
LARP4Q71RC2 PON2-211ENST00000483292 699 ntTSL 37.41□□□□□ -1.223e-11■□□□□ 10.4
LARP4Q71RC2 PON2-203ENST00000446142 1099 ntTSL 1 (best)4.7□□□□□ -1.663e-11■□□□□ 10.4
LARP4Q71RC2 CTSC-208ENST00000533897 4344 ntTSL 24.49□□□□□ -1.693e-7■□□□□ 10.4
LARP4Q71RC2 TP53-216ENST00000576024 175 ntTSL 1 (best)3.76□□□□□ -1.813e-11■□□□□ 10.4
LARP4Q71RC2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.054e-8■□□□□ 10.4
LARP4Q71RC2 REEP5-204ENST00000497856 1779 ntTSL 1 (best)14.2□□□□□ -0.144e-8■□□□□ 10.4
LARP4Q71RC2 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.13□□□□□ -0.474e-8■□□□□ 10.4
LARP4Q71RC2 REEP5-206ENST00000511865 1187 ntTSL 211.51□□□□□ -0.574e-8■□□□□ 10.4
LARP4Q71RC2 ACTN4-211ENST00000589528 441 ntTSL 213.75□□□□□ -0.214e-8■□□□□ 10.4
Retrieved 100 of 15,922 protein–RNA pairs in 178.8 ms