RNA–Protein interactions for RNA: ENST00000576024.1

TP53-216, Transcript of tumor protein p53, humanhuman

TSL 1 (best)

Gene TP53, Length 175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-216ENST00000576024 AEBP2Q6ZN18 517 aaPredicted RBP14.45□□□□□ -0.1
TP53-216ENST00000576024 CHIC1Q5VXU3 224 aa14.21□□□□□ -0.13
TP53-216ENST00000576024 PHF23Q9BUL5 403 aaPredicted RBP12.43□□□□□ -0.42
TP53-216ENST00000576024 SENP3Q9H4L4 574 aaPredicted RBP12.37□□□□□ -0.43
TP53-216ENST00000576024 PLPPR3Q6T4P5 718 aa11.6□□□□□ -0.55
TP53-216ENST00000576024 FOXD1Q16676 465 aa11.4□□□□□ -0.58
TP53-216ENST00000576024 ADRA2BP18089 450 aa10.96□□□□□ -0.65
TP53-216ENST00000576024 PPP6R1Q9UPN7 881 aa10.95□□□□□ -0.66
TP53-216ENST00000576024 PIAS4Q8N2W9 510 aaPredicted RBP10.8□□□□□ -0.68
TP53-216ENST00000576024 MSH5O43196 834 aa10.59□□□□□ -0.71
TP53-216ENST00000576024 PPP4R3CPQ6ZMV5 832 aa10.18□□□□□ -0.78
TP53-216ENST00000576024 SCAF1Q9H7N4 1312 aaKnown RBP10.15□□□□□ -0.78
TP53-216ENST00000576024 NCBP3Q53F19 620 aaKnown RBP10□□□□□ -0.81
TP53-216ENST00000576024 KCNA4P22459 653 aa9.95□□□□□ -0.82
TP53-216ENST00000576024 CNKSR2Q8WXI2 1034 aa9.92□□□□□ -0.82
TP53-216ENST00000576024 MAPK8IP2Q13387 824 aaPredicted RBP9.91□□□□□ -0.82
TP53-216ENST00000576024 DMRT2Q9Y5R5 561 aa9.84□□□□□ -0.83
TP53-216ENST00000576024 NPM3O75607 178 aaKnown RBP9.77□□□□□ -0.85
TP53-216ENST00000576024 RNF216Q9NWF9 866 aaPredicted RBP9.72□□□□□ -0.85
TP53-216ENST00000576024 HOXD11P31277 338 aaPredicted RBP9.65□□□□□ -0.86
TP53-216ENST00000576024 SLC4A1APQ9BWU0 796 aaKnown RBP9.53□□□□□ -0.88
TP53-216ENST00000576024 DNAJC5BQ9UF47 199 aa9.53□□□□□ -0.88
TP53-216ENST00000576024 POTEDQ86YR6 584 aa9.51□□□□□ -0.89
TP53-216ENST00000576024 DCAF8L1A6NGE4 600 aa9.43□□□□□ -0.9
TP53-216ENST00000576024 EHMT2Q96KQ7 1210 aa9.27□□□□□ -0.93
TP53-216ENST00000576024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.22□□□□□ -0.93
TP53-216ENST00000576024 FOXD4L1Q9NU39 408 aa9.21□□□□□ -0.94
TP53-216ENST00000576024 SLC4A2P04920 1241 aa9.19□□□□□ -0.94
TP53-216ENST00000576024 ZBTB22O15209 634 aa9.12□□□□□ -0.95
TP53-216ENST00000576024 CSRNP3Q8WYN3 585 aa9.12□□□□□ -0.95
TP53-216ENST00000576024 MYCNP04198 464 aaPredicted RBP9.08□□□□□ -0.96
TP53-216ENST00000576024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.04□□□□□ -0.96
TP53-216ENST00000576024 HNRNPUL2Q1KMD3 747 aaKnown RBP9.04□□□□□ -0.96
TP53-216ENST00000576024 U3KPZ7 1027 aaPredicted RBP9.04□□□□□ -0.96
TP53-216ENST00000576024 RNF39Q9H2S5 420 aa9.03□□□□□ -0.96
TP53-216ENST00000576024 SAMD1Q6SPF0 538 aaPredicted RBP8.98□□□□□ -0.97
TP53-216ENST00000576024 APLP2Q06481 763 aa8.96□□□□□ -0.98
TP53-216ENST00000576024 C1QBPQ07021 282 aaKnown RBP8.96□□□□□ -0.98
TP53-216ENST00000576024 ATXN8OSP0DMR3 200 aa8.91□□□□□ -0.98
TP53-216ENST00000576024 CACNB1Q02641 598 aaPredicted RBP8.79□□□□□ -1
TP53-216ENST00000576024 ZNF219Q9P2Y4 722 aaPredicted RBP8.78□□□□□ -1
TP53-216ENST00000576024 CAPN15O75808 1086 aa8.77□□□□□ -1.01
TP53-216ENST00000576024 SPINK5Q9NQ38 1064 aaPredicted RBP8.75□□□□□ -1.01
TP53-216ENST00000576024 ATF5Q9Y2D1 282 aaPredicted RBP8.73□□□□□ -1.01
TP53-216ENST00000576024 TRHP20396 242 aaPredicted RBP8.72□□□□□ -1.01
TP53-216ENST00000576024 DSG3P32926 999 aa8.59□□□□□ -1.03
TP53-216ENST00000576024 POLA2Q14181 598 aa8.58□□□□□ -1.04
TP53-216ENST00000576024 ABCB7O75027 752 aa8.57□□□□□ -1.04
TP53-216ENST00000576024 ZBTB12Q9Y330 459 aaPredicted RBP8.54□□□□□ -1.04
TP53-216ENST00000576024 FBLN2P98095 1184 aa8.49□□□□□ -1.05
TP53-216ENST00000576024 MKRN4PQ13434 485 aaPredicted RBP8.37□□□□□ -1.07
TP53-216ENST00000576024 OSCARQ8IYS5 282 aa8.29□□□□□ -1.08
TP53-216ENST00000576024 FKBP8Q14318 412 aa8.28□□□□□ -1.08
TP53-216ENST00000576024 SPDYE2BA6NHP3 402 aa8.27□□□□□ -1.09
TP53-216ENST00000576024 SPDYE6P0CI01 402 aa8.27□□□□□ -1.09
TP53-216ENST00000576024 SPDYE2Q495Y8 402 aa8.27□□□□□ -1.09
TP53-216ENST00000576024 RBM42Q9BTD8 480 aaKnown RBP8.27□□□□□ -1.09
TP53-216ENST00000576024 SPDYE4A6NLX3 237 aa8.26□□□□□ -1.09
TP53-216ENST00000576024 ZNF692Q9BU19 519 aaPredicted RBP8.21□□□□□ -1.1
TP53-216ENST00000576024 SSUH2Q9Y2M2 353 aa8.17□□□□□ -1.1
TP53-216ENST00000576024 AKT1S1Q96B36 256 aa8.13□□□□□ -1.11
TP53-216ENST00000576024 PROM2Q8N271 834 aa8.11□□□□□ -1.11
TP53-216ENST00000576024 PABPN1Q86U42 306 aaKnown RBP eCLIP8.09□□□□□ -1.11
TP53-216ENST00000576024 FBXO3Q9UK99 471 aa8.05□□□□□ -1.12
TP53-216ENST00000576024 STAG3Q9UJ98 1225 aa8.03□□□□□ -1.12
TP53-216ENST00000576024 REM2Q8IYK8 340 aaPredicted RBP8.02□□□□□ -1.13
TP53-216ENST00000576024 SPDYE1Q8NFV5 336 aaPredicted RBP8.02□□□□□ -1.13
TP53-216ENST00000576024 CLEC11AQ9Y240 323 aa7.95□□□□□ -1.14
TP53-216ENST00000576024 PITPNM1O00562 1244 aa7.92□□□□□ -1.14
TP53-216ENST00000576024 PRR29P0C7W0 189 aa7.9□□□□□ -1.14
TP53-216ENST00000576024 VASPP50552 380 aaPredicted RBP7.89□□□□□ -1.15
TP53-216ENST00000576024 PLEKHG5O94827 1062 aa7.88□□□□□ -1.15
TP53-216ENST00000576024 CHRDL2Q6WN34 429 aa7.86□□□□□ -1.15
TP53-216ENST00000576024 PLCD3Q8N3E9 789 aa7.85□□□□□ -1.15
TP53-216ENST00000576024 MIER1Q8N108 512 aa7.83□□□□□ -1.16
TP53-216ENST00000576024 ZBTB47Q9UFB7 747 aaPredicted RBP7.82□□□□□ -1.16
TP53-216ENST00000576024 FXR2P51116 673 aaKnown RBP eCLIP7.77□□□□□ -1.17
TP53-216ENST00000576024 KLHL34Q8N239 644 aa7.76□□□□□ -1.17
TP53-216ENST00000576024 CREBZFQ9NS37 354 aa7.76□□□□□ -1.17
TP53-216ENST00000576024 PRKAR2AP13861 404 aaKnown RBP7.74□□□□□ -1.17
TP53-216ENST00000576024 IFNLR1Q8IU57 520 aaPredicted RBP7.74□□□□□ -1.17
TP53-216ENST00000576024 PIP4P2Q8N4L2 257 aa7.74□□□□□ -1.17
TP53-216ENST00000576024 NPM1P06748 294 aaKnown RBP eCLIP7.71□□□□□ -1.18
TP53-216ENST00000576024 CHADLQ6NUI6 762 aa7.7□□□□□ -1.18
TP53-216ENST00000576024 SPOCK2Q92563 424 aa7.7□□□□□ -1.18
TP53-216ENST00000576024 FARP1Q9Y4F1 1045 aaPredicted RBP7.68□□□□□ -1.18
TP53-216ENST00000576024 MNX1P50219 401 aaPredicted RBP7.67□□□□□ -1.18
TP53-216ENST00000576024 AMER1Q5JTC6 1135 aaPredicted RBP7.66□□□□□ -1.18
TP53-216ENST00000576024 FAM212AQ96EL1 285 aa7.61□□□□□ -1.19
TP53-216ENST00000576024 NUBP1P53384 320 aa7.6□□□□□ -1.19
TP53-216ENST00000576024 PAK3O75914 559 aaPredicted RBP7.59□□□□□ -1.19
TP53-216ENST00000576024 GSE1Q14687 1217 aa7.59□□□□□ -1.19
TP53-216ENST00000576024 POTEHQ6S545 545 aa7.56□□□□□ -1.2
TP53-216ENST00000576024 CIZ1Q9ULV3 898 aaPredicted RBP7.56□□□□□ -1.2
TP53-216ENST00000576024 DCAF8Q5TAQ9 597 aa7.55□□□□□ -1.2
TP53-216ENST00000576024 RASEFQ8IZ41 740 aa7.55□□□□□ -1.2
TP53-216ENST00000576024 TRIM41Q8WV44 630 aa7.55□□□□□ -1.2
TP53-216ENST00000576024 RTN4Q9NQC3 1192 aaKnown RBP7.55□□□□□ -1.2
TP53-216ENST00000576024 CD44P16070 742 aaKnown RBP7.53□□□□□ -1.2
TP53-216ENST00000576024 TSPYL2Q9H2G4 693 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms