Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.29■□□□□ 0.84
PPP4R3AQ6IN85 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 AC008764.6-201ENST00000595909 2069 ntBASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 AC096633.1-201ENST00000422446 749 ntBASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 AC091607.1-201ENST00000490318 1060 ntBASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PPP4R3AQ6IN85 AC125634.1-201ENST00000438758 1403 ntBASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 LINC00265-3P-201ENST00000447588 903 ntBASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 VENTXP7-201ENST00000475503 772 ntBASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 Z69720.1-201ENST00000601483 472 ntBASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 AL138831.2-201ENST00000606564 490 ntBASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.27■□□□□ 0.84
PPP4R3AQ6IN85 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
PPP4R3AQ6IN85 OR6D1P-202ENST00000641007 5290 ntBASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 IGHV3-47-201ENST00000425060 335 ntBASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 AC116407.2-201ENST00000613639 860 ntBASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PPP4R3AQ6IN85 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms