Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.35■□□□□ 0.53
ALFQ53S48 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.35■□□□□ 0.53
ALFQ53S48 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.35■□□□□ 0.53
ALFQ53S48 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.35■□□□□ 0.53
ALFQ53S48 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ALFQ53S48 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.35■□□□□ 0.53
ALFQ53S48 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.35■□□□□ 0.53
ALFQ53S48 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ALFQ53S48 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALFQ53S48 NOC2LP1-202ENST00000452600 2235 ntBASIC18.35■□□□□ 0.53
ALFQ53S48 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
ALFQ53S48 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALFQ53S48 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALFQ53S48 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ALFQ53S48 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALFQ53S48 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.34■□□□□ 0.53
ALFQ53S48 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.34■□□□□ 0.53
ALFQ53S48 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ALFQ53S48 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALFQ53S48 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALFQ53S48 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALFQ53S48 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.34■□□□□ 0.53
ALFQ53S48 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ALFQ53S48 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALFQ53S48 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.34■□□□□ 0.53
ALFQ53S48 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.34■□□□□ 0.53
ALFQ53S48 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.34■□□□□ 0.53
ALFQ53S48 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALFQ53S48 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALFQ53S48 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALFQ53S48 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.34■□□□□ 0.53
ALFQ53S48 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.34■□□□□ 0.53
ALFQ53S48 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.34■□□□□ 0.53
ALFQ53S48 AC096582.2-201ENST00000510860 516 ntBASIC18.34■□□□□ 0.53
ALFQ53S48 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.34■□□□□ 0.53
ALFQ53S48 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.34■□□□□ 0.53
ALFQ53S48 AC009949.1-201ENST00000623048 1830 ntBASIC18.34■□□□□ 0.53
ALFQ53S48 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.34■□□□□ 0.53
ALFQ53S48 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALFQ53S48 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
ALFQ53S48 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ALFQ53S48 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALFQ53S48 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALFQ53S48 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.34■□□□□ 0.53
ALFQ53S48 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALFQ53S48 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.34■□□□□ 0.53
ALFQ53S48 AC010460.3-201ENST00000511359 1579 ntBASIC18.34■□□□□ 0.53
ALFQ53S48 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ALFQ53S48 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
ALFQ53S48 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALFQ53S48 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ALFQ53S48 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
ALFQ53S48 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ALFQ53S48 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.33■□□□□ 0.53
ALFQ53S48 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALFQ53S48 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALFQ53S48 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALFQ53S48 NUS1P2-201ENST00000417358 873 ntBASIC18.33■□□□□ 0.52
ALFQ53S48 TSPY19P-201ENST00000418461 509 ntBASIC18.33■□□□□ 0.52
ALFQ53S48 TSPY18P-201ENST00000441642 509 ntBASIC18.33■□□□□ 0.52
ALFQ53S48 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.33■□□□□ 0.52
ALFQ53S48 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALFQ53S48 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.33■□□□□ 0.52
ALFQ53S48 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.33■□□□□ 0.52
ALFQ53S48 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALFQ53S48 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.33■□□□□ 0.52
ALFQ53S48 AL732292.2-201ENST00000609649 430 ntBASIC18.33■□□□□ 0.52
ALFQ53S48 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.33■□□□□ 0.52
ALFQ53S48 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALFQ53S48 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALFQ53S48 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.33■□□□□ 0.52
ALFQ53S48 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.33■□□□□ 0.52
ALFQ53S48 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALFQ53S48 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ALFQ53S48 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.33■□□□□ 0.52
ALFQ53S48 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALFQ53S48 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALFQ53S48 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.33■□□□□ 0.52
ALFQ53S48 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALFQ53S48 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALFQ53S48 TP73-AS1-210ENST00000637775 1455 ntBASIC18.33■□□□□ 0.52
ALFQ53S48 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALFQ53S48 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.32■□□□□ 0.52
ALFQ53S48 AC090340.1-201ENST00000620778 4980 ntBASIC18.32■□□□□ 0.52
ALFQ53S48 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALFQ53S48 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALFQ53S48 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALFQ53S48 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALFQ53S48 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.32■□□□□ 0.52
ALFQ53S48 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALFQ53S48 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALFQ53S48 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.32■□□□□ 0.52
ALFQ53S48 RCN1P2-201ENST00000398357 915 ntBASIC18.32■□□□□ 0.52
ALFQ53S48 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
ALFQ53S48 AC096633.1-201ENST00000422446 749 ntBASIC18.32■□□□□ 0.52
ALFQ53S48 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.32■□□□□ 0.52
ALFQ53S48 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.32■□□□□ 0.52
ALFQ53S48 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.32■□□□□ 0.52
ALFQ53S48 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.32■□□□□ 0.52
ALFQ53S48 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms