Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC009154.2-201ENST00000621177 724 ntBASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTC1Q2NKJ3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 AP002414.3-201ENST00000589352 1468 ntBASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 MIR149-201ENST00000384879 89 ntBASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 AC007967.2-201ENST00000432613 625 ntBASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 MTDHP4-201ENST00000600287 670 ntBASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 HEIH-201ENST00000623091 1652 ntBASIC19.05■□□□□ 0.64
CTC1Q2NKJ3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 KRT18P28-201ENST00000453838 1332 ntBASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 AC211486.1-202ENST00000416371 468 ntBASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 AC009947.1-201ENST00000444350 727 ntBASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 AC211476.1-201ENST00000503899 468 ntBASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 NKAPP1-205ENST00000585790 367 ntBASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 AC141586.3-201ENST00000562166 1838 ntBASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTC1Q2NKJ3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 AC120498.9-201ENST00000339021 3867 ntBASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTC1Q2NKJ3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms