Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.58■□□□□ 0.73
UBXN1Q04323 MMP23A-201ENST00000234610 1017 ntBASIC19.58■□□□□ 0.72
UBXN1Q04323 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBXN1Q04323 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
UBXN1Q04323 HMGA1P5-201ENST00000412453 271 ntBASIC19.58■□□□□ 0.72
UBXN1Q04323 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
UBXN1Q04323 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBXN1Q04323 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.58■□□□□ 0.72
UBXN1Q04323 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.58■□□□□ 0.72
UBXN1Q04323 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
UBXN1Q04323 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.58■□□□□ 0.72
UBXN1Q04323 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.58■□□□□ 0.72
UBXN1Q04323 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.58■□□□□ 0.72
UBXN1Q04323 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.58■□□□□ 0.72
UBXN1Q04323 MIR4497-201ENST00000583208 89 ntBASIC19.58■□□□□ 0.72
UBXN1Q04323 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBXN1Q04323 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.72
UBXN1Q04323 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBXN1Q04323 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBXN1Q04323 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.58■□□□□ 0.72
UBXN1Q04323 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBXN1Q04323 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBXN1Q04323 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.58■□□□□ 0.72
UBXN1Q04323 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
UBXN1Q04323 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
UBXN1Q04323 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
UBXN1Q04323 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.57■□□□□ 0.72
UBXN1Q04323 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.57■□□□□ 0.72
UBXN1Q04323 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.57■□□□□ 0.72
UBXN1Q04323 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
UBXN1Q04323 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.57■□□□□ 0.72
UBXN1Q04323 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.57■□□□□ 0.72
UBXN1Q04323 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.57■□□□□ 0.72
UBXN1Q04323 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.57■□□□□ 0.72
UBXN1Q04323 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.57■□□□□ 0.72
UBXN1Q04323 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
UBXN1Q04323 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBXN1Q04323 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
UBXN1Q04323 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
UBXN1Q04323 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBXN1Q04323 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBXN1Q04323 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.56■□□□□ 0.72
UBXN1Q04323 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.56■□□□□ 0.72
UBXN1Q04323 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBXN1Q04323 AC009949.1-201ENST00000623048 1830 ntBASIC19.56■□□□□ 0.72
UBXN1Q04323 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBXN1Q04323 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UBXN1Q04323 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.56■□□□□ 0.72
UBXN1Q04323 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.56■□□□□ 0.72
UBXN1Q04323 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.56■□□□□ 0.72
UBXN1Q04323 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.56■□□□□ 0.72
UBXN1Q04323 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.56■□□□□ 0.72
UBXN1Q04323 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.56■□□□□ 0.72
UBXN1Q04323 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.56■□□□□ 0.72
UBXN1Q04323 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.56■□□□□ 0.72
UBXN1Q04323 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.56■□□□□ 0.72
UBXN1Q04323 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBXN1Q04323 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
UBXN1Q04323 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBXN1Q04323 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBXN1Q04323 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.56■□□□□ 0.72
UBXN1Q04323 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBXN1Q04323 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBXN1Q04323 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBXN1Q04323 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UBXN1Q04323 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UBXN1Q04323 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBXN1Q04323 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.55■□□□□ 0.72
UBXN1Q04323 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
UBXN1Q04323 AD000864.1-201ENST00000624076 2295 ntBASIC19.55■□□□□ 0.72
UBXN1Q04323 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBXN1Q04323 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
UBXN1Q04323 AC022211.2-201ENST00000585075 2527 ntBASIC19.55■□□□□ 0.72
UBXN1Q04323 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBXN1Q04323 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBXN1Q04323 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.55■□□□□ 0.72
UBXN1Q04323 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBXN1Q04323 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.55■□□□□ 0.72
UBXN1Q04323 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
UBXN1Q04323 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.55■□□□□ 0.72
UBXN1Q04323 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBXN1Q04323 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.55■□□□□ 0.72
UBXN1Q04323 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.55■□□□□ 0.72
UBXN1Q04323 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.55■□□□□ 0.72
UBXN1Q04323 AC116407.2-201ENST00000613639 860 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms