Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDR2Q01850 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.05■□□□□ 0.64
CDR2Q01850 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.05■□□□□ 0.64
CDR2Q01850 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDR2Q01850 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
CDR2Q01850 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.04■□□□□ 0.64
CDR2Q01850 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.04■□□□□ 0.64
CDR2Q01850 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CDR2Q01850 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.04■□□□□ 0.64
CDR2Q01850 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.04■□□□□ 0.64
CDR2Q01850 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.04■□□□□ 0.64
CDR2Q01850 SPDYE13P-201ENST00000445314 798 ntBASIC19.04■□□□□ 0.64
CDR2Q01850 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 AC112698.1-201ENST00000510299 916 ntBASIC19.04■□□□□ 0.64
CDR2Q01850 AC022616.7-201ENST00000525383 220 ntBASIC19.04■□□□□ 0.64
CDR2Q01850 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.04■□□□□ 0.64
CDR2Q01850 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.04■□□□□ 0.64
CDR2Q01850 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CDR2Q01850 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.04■□□□□ 0.64
CDR2Q01850 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CDR2Q01850 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDR2Q01850 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CDR2Q01850 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.03■□□□□ 0.64
CDR2Q01850 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.03■□□□□ 0.64
CDR2Q01850 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CDR2Q01850 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CDR2Q01850 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.03■□□□□ 0.64
CDR2Q01850 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.03■□□□□ 0.64
CDR2Q01850 DDX43P3-201ENST00000441064 443 ntBASIC19.03■□□□□ 0.64
CDR2Q01850 DUX4L26-201ENST00000489078 1255 ntBASIC19.03■□□□□ 0.64
CDR2Q01850 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.03■□□□□ 0.64
CDR2Q01850 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.03■□□□□ 0.64
CDR2Q01850 AC005332.3-201ENST00000589904 676 ntBASIC19.03■□□□□ 0.64
CDR2Q01850 AL390719.2-201ENST00000606993 987 ntBASIC19.03■□□□□ 0.64
CDR2Q01850 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CDR2Q01850 AC083849.1-201ENST00000615227 514 ntBASIC19.03■□□□□ 0.64
CDR2Q01850 AC133963.1-201ENST00000504166 1679 ntBASIC19.03■□□□□ 0.64
CDR2Q01850 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CDR2Q01850 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CDR2Q01850 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.03■□□□□ 0.64
CDR2Q01850 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CDR2Q01850 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.03■□□□□ 0.64
CDR2Q01850 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CDR2Q01850 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CDR2Q01850 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDR2Q01850 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDR2Q01850 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.02■□□□□ 0.64
CDR2Q01850 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDR2Q01850 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.02■□□□□ 0.64
CDR2Q01850 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CDR2Q01850 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDR2Q01850 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CDR2Q01850 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.02■□□□□ 0.64
CDR2Q01850 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.02■□□□□ 0.64
CDR2Q01850 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.02■□□□□ 0.64
CDR2Q01850 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.02■□□□□ 0.64
CDR2Q01850 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.02■□□□□ 0.64
CDR2Q01850 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDR2Q01850 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDR2Q01850 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDR2Q01850 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.02■□□□□ 0.64
CDR2Q01850 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDR2Q01850 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDR2Q01850 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDR2Q01850 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CDR2Q01850 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDR2Q01850 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CDR2Q01850 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CDR2Q01850 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.01■□□□□ 0.63
CDR2Q01850 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDR2Q01850 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDR2Q01850 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms