Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGA2P52926 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.29■□□□□ 0.2
HMGA2P52926 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HMGA2P52926 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
HMGA2P52926 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
HMGA2P52926 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGA2P52926 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.28■□□□□ 0.2
HMGA2P52926 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HMGA2P52926 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
HMGA2P52926 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 INGX-201ENST00000359239 846 ntBASIC16.28■□□□□ 0.2
HMGA2P52926 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HMGA2P52926 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HMGA2P52926 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HMGA2P52926 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.28■□□□□ 0.2
HMGA2P52926 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGA2P52926 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.28■□□□□ 0.2
HMGA2P52926 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGA2P52926 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.28■□□□□ 0.2
HMGA2P52926 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.28■□□□□ 0.2
HMGA2P52926 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGA2P52926 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGA2P52926 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HMGA2P52926 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGA2P52926 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
HMGA2P52926 AC116353.5-201ENST00000638148 1699 ntBASIC16.27■□□□□ 0.2
HMGA2P52926 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HMGA2P52926 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HMGA2P52926 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 LYSMD4-203ENST00000378904 2122 ntBASIC16.27■□□□□ 0.2
HMGA2P52926 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGA2P52926 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HMGA2P52926 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.27■□□□□ 0.2
HMGA2P52926 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 MIR1238-201ENST00000408483 83 ntBASIC16.27■□□□□ 0.2
HMGA2P52926 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 AC128688.1-201ENST00000487626 519 ntBASIC16.27■□□□□ 0.2
HMGA2P52926 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
HMGA2P52926 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGA2P52926 MIR4785-201ENST00000585005 73 ntBASIC16.27■□□□□ 0.2
HMGA2P52926 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.27■□□□□ 0.2
HMGA2P52926 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGA2P52926 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.27■□□□□ 0.2
HMGA2P52926 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGA2P52926 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGA2P52926 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGA2P52926 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGA2P52926 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGA2P52926 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HMGA2P52926 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGA2P52926 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGA2P52926 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGA2P52926 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
HMGA2P52926 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGA2P52926 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGA2P52926 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGA2P52926 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGA2P52926 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGA2P52926 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.26■□□□□ 0.19
HMGA2P52926 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGA2P52926 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
HMGA2P52926 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGA2P52926 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGA2P52926 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
HMGA2P52926 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGA2P52926 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HMGA2P52926 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGA2P52926 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGA2P52926 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGA2P52926 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGA2P52926 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.26■□□□□ 0.19
HMGA2P52926 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HMGA2P52926 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGA2P52926 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms