Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
RAB28P51157 TP73-AS1-210ENST00000637775 1455 ntBASIC17.24■□□□□ 0.35
RAB28P51157 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB28P51157 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB28P51157 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB28P51157 AC009949.1-201ENST00000623048 1830 ntBASIC17.24■□□□□ 0.35
RAB28P51157 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB28P51157 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB28P51157 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB28P51157 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB28P51157 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB28P51157 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB28P51157 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB28P51157 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB28P51157 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.23■□□□□ 0.35
RAB28P51157 AC114341.1-201ENST00000618070 349 ntBASIC17.23■□□□□ 0.35
RAB28P51157 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB28P51157 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB28P51157 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB28P51157 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
RAB28P51157 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RAB28P51157 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB28P51157 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB28P51157 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB28P51157 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB28P51157 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.22■□□□□ 0.35
RAB28P51157 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB28P51157 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
RAB28P51157 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB28P51157 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
RAB28P51157 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB28P51157 AC007967.3-201ENST00000434308 558 ntBASIC17.22■□□□□ 0.35
RAB28P51157 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB28P51157 FOSL1P1-201ENST00000511041 816 ntBASIC17.22■□□□□ 0.35
RAB28P51157 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB28P51157 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB28P51157 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB28P51157 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB28P51157 AC011467.2-201ENST00000598425 242 ntBASIC17.22■□□□□ 0.35
RAB28P51157 AL121772.3-201ENST00000610840 674 ntBASIC17.22■□□□□ 0.35
RAB28P51157 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 AC090340.1-201ENST00000620778 4980 ntBASIC17.22■□□□□ 0.35
RAB28P51157 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RAB28P51157 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB28P51157 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
RAB28P51157 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB28P51157 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB28P51157 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB28P51157 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RAB28P51157 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RAB28P51157 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAB28P51157 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB28P51157 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB28P51157 AC010460.3-201ENST00000511359 1579 ntBASIC17.21■□□□□ 0.35
RAB28P51157 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms