Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21■□□□□ 0.95
NEDD4P46934 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NEDD4P46934 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NEDD4P46934 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21■□□□□ 0.95
NEDD4P46934 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21■□□□□ 0.95
NEDD4P46934 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21■□□□□ 0.95
NEDD4P46934 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21■□□□□ 0.95
NEDD4P46934 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD4P46934 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD4P46934 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD4P46934 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.99■□□□□ 0.95
NEDD4P46934 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD4P46934 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD4P46934 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.99■□□□□ 0.95
NEDD4P46934 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD4P46934 AC097374.2-201ENST00000618617 1306 ntBASIC20.99■□□□□ 0.95
NEDD4P46934 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD4P46934 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.99■□□□□ 0.95
NEDD4P46934 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD4P46934 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.99■□□□□ 0.95
NEDD4P46934 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD4P46934 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
NEDD4P46934 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD4P46934 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD4P46934 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD4P46934 TSPY19P-201ENST00000418461 509 ntBASIC20.99■□□□□ 0.95
NEDD4P46934 SLC25A6P5-201ENST00000435663 894 ntBASIC20.99■□□□□ 0.95
NEDD4P46934 DDX43P3-201ENST00000441064 443 ntBASIC20.99■□□□□ 0.95
NEDD4P46934 TSPY18P-201ENST00000441642 509 ntBASIC20.99■□□□□ 0.95
NEDD4P46934 AC009533.2-201ENST00000543664 586 ntBASIC20.99■□□□□ 0.95
NEDD4P46934 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.99■□□□□ 0.95
NEDD4P46934 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.99■□□□□ 0.95
NEDD4P46934 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.99■□□□□ 0.95
NEDD4P46934 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD4P46934 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD4P46934 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD4P46934 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD4P46934 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NEDD4P46934 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD4P46934 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
NEDD4P46934 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD4P46934 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD4P46934 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.98■□□□□ 0.95
NEDD4P46934 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD4P46934 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD4P46934 AC020763.4-201ENST00000623414 4170 ntBASIC20.98■□□□□ 0.95
NEDD4P46934 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD4P46934 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.98■□□□□ 0.95
NEDD4P46934 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.98■□□□□ 0.95
NEDD4P46934 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD4P46934 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD4P46934 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.98■□□□□ 0.95
NEDD4P46934 KRT18P31-201ENST00000506277 1292 ntBASIC20.98■□□□□ 0.95
NEDD4P46934 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD4P46934 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD4P46934 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NEDD4P46934 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD4P46934 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NEDD4P46934 INTS4P1-201ENST00000438455 1935 ntBASIC20.98■□□□□ 0.95
NEDD4P46934 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD4P46934 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NEDD4P46934 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD4P46934 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD4P46934 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD4P46934 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD4P46934 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD4P46934 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.97■□□□□ 0.95
NEDD4P46934 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD4P46934 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
NEDD4P46934 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD4P46934 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.97■□□□□ 0.95
NEDD4P46934 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD4P46934 REXO1L11P-201ENST00000620964 1927 ntBASIC20.97■□□□□ 0.95
NEDD4P46934 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD4P46934 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
NEDD4P46934 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.97■□□□□ 0.95
NEDD4P46934 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD4P46934 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD4P46934 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.97■□□□□ 0.95
NEDD4P46934 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.97■□□□□ 0.95
NEDD4P46934 UNC93B7-201ENST00000509439 705 ntBASIC20.97■□□□□ 0.95
NEDD4P46934 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.97■□□□□ 0.95
NEDD4P46934 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.97■□□□□ 0.95
NEDD4P46934 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD4P46934 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NEDD4P46934 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD4P46934 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.97■□□□□ 0.95
NEDD4P46934 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD4P46934 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD4P46934 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.96■□□□□ 0.95
NEDD4P46934 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms