Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC1A2P43004 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 AC108860.2-201ENST00000562760 2183 ntBASIC17.8■□□□□ 0.44
SLC1A2P43004 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC1A2P43004 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC1A2P43004 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.8■□□□□ 0.44
SLC1A2P43004 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC1A2P43004 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.8■□□□□ 0.44
SLC1A2P43004 HYMAI.1-201ENST00000620949 238 ntBASIC17.8■□□□□ 0.44
SLC1A2P43004 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC1A2P43004 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC1A2P43004 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SLC1A2P43004 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC1A2P43004 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SLC1A2P43004 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SLC1A2P43004 REXO1L11P-201ENST00000620964 1927 ntBASIC17.8■□□□□ 0.44
SLC1A2P43004 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC1A2P43004 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SLC1A2P43004 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC1A2P43004 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.79■□□□□ 0.44
SLC1A2P43004 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC1A2P43004 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.79■□□□□ 0.44
SLC1A2P43004 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
SLC1A2P43004 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
SLC1A2P43004 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC1A2P43004 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.79■□□□□ 0.44
SLC1A2P43004 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC1A2P43004 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SLC1A2P43004 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC1A2P43004 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC1A2P43004 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC1A2P43004 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 AC020916.1-201ENST00000587762 1774 ntBASIC17.79■□□□□ 0.44
SLC1A2P43004 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A2P43004 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A2P43004 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A2P43004 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A2P43004 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC1A2P43004 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SLC1A2P43004 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC1A2P43004 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A2P43004 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A2P43004 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC1A2P43004 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A2P43004 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A2P43004 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A2P43004 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC1A2P43004 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC1A2P43004 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A2P43004 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC1A2P43004 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A2P43004 DDX43P3-201ENST00000441064 443 ntBASIC17.78■□□□□ 0.44
SLC1A2P43004 AC092647.4-201ENST00000457211 535 ntBASIC17.78■□□□□ 0.44
SLC1A2P43004 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.78■□□□□ 0.44
SLC1A2P43004 AC112698.1-201ENST00000510299 916 ntBASIC17.78■□□□□ 0.44
SLC1A2P43004 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC1A2P43004 GPR32P1-201ENST00000601788 811 ntBASIC17.78■□□□□ 0.44
SLC1A2P43004 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A2P43004 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC1A2P43004 HLA-J-201ENST00000462773 1622 ntBASIC17.78■□□□□ 0.44
SLC1A2P43004 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A2P43004 LINC01311-201ENST00000565162 1445 ntBASIC17.78■□□□□ 0.44
SLC1A2P43004 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC1A2P43004 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A2P43004 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SLC1A2P43004 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A2P43004 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A2P43004 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms