Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.64■□□□□ 0.57
MTHFRP42898 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.64■□□□□ 0.57
MTHFRP42898 SNHG9-202ENST00000564014 471 ntBASIC18.64■□□□□ 0.57
MTHFRP42898 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.64■□□□□ 0.57
MTHFRP42898 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.64■□□□□ 0.57
MTHFRP42898 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MTHFRP42898 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
MTHFRP42898 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MTHFRP42898 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MTHFRP42898 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
MTHFRP42898 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
MTHFRP42898 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.64■□□□□ 0.57
MTHFRP42898 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MTHFRP42898 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MTHFRP42898 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MTHFRP42898 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
MTHFRP42898 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MTHFRP42898 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MTHFRP42898 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
MTHFRP42898 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MTHFRP42898 PMPCAP1-201ENST00000508114 1576 ntBASIC18.64■□□□□ 0.57
MTHFRP42898 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MTHFRP42898 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MTHFRP42898 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.63■□□□□ 0.57
MTHFRP42898 AC073621.1-201ENST00000392730 636 ntBASIC18.63■□□□□ 0.57
MTHFRP42898 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.63■□□□□ 0.57
MTHFRP42898 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.63■□□□□ 0.57
MTHFRP42898 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.63■□□□□ 0.57
MTHFRP42898 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MTHFRP42898 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MTHFRP42898 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.63■□□□□ 0.57
MTHFRP42898 AC002310.6-201ENST00000624451 1377 ntBASIC18.63■□□□□ 0.57
MTHFRP42898 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MTHFRP42898 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
MTHFRP42898 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MTHFRP42898 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MTHFRP42898 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MTHFRP42898 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MTHFRP42898 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MTHFRP42898 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.62■□□□□ 0.57
MTHFRP42898 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTHFRP42898 AC138932.1-201ENST00000534164 6830 ntBASIC18.62■□□□□ 0.57
MTHFRP42898 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTHFRP42898 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.62■□□□□ 0.57
MTHFRP42898 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MTHFRP42898 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MTHFRP42898 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.62■□□□□ 0.57
MTHFRP42898 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MTHFRP42898 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.62■□□□□ 0.57
MTHFRP42898 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MTHFRP42898 AC122714.2-201ENST00000502787 707 ntBASIC18.62■□□□□ 0.57
MTHFRP42898 YBX1P5-201ENST00000509441 847 ntBASIC18.62■□□□□ 0.57
MTHFRP42898 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.62■□□□□ 0.57
MTHFRP42898 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
MTHFRP42898 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTHFRP42898 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTHFRP42898 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MTHFRP42898 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTHFRP42898 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.62■□□□□ 0.57
MTHFRP42898 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTHFRP42898 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTHFRP42898 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTHFRP42898 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
MTHFRP42898 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MTHFRP42898 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
MTHFRP42898 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MTHFRP42898 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
MTHFRP42898 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MTHFRP42898 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MTHFRP42898 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MTHFRP42898 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MTHFRP42898 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.61■□□□□ 0.57
MTHFRP42898 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.61■□□□□ 0.57
MTHFRP42898 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.61■□□□□ 0.57
MTHFRP42898 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MTHFRP42898 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.61■□□□□ 0.57
MTHFRP42898 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MTHFRP42898 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.61■□□□□ 0.57
MTHFRP42898 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MTHFRP42898 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
MTHFRP42898 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MTHFRP42898 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.61■□□□□ 0.57
MTHFRP42898 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MTHFRP42898 NEFHP1-201ENST00000412845 2629 ntBASIC18.61■□□□□ 0.57
MTHFRP42898 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
MTHFRP42898 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MTHFRP42898 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.61■□□□□ 0.57
MTHFRP42898 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.61■□□□□ 0.57
MTHFRP42898 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MTHFRP42898 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
MTHFRP42898 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.6■□□□□ 0.57
MTHFRP42898 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTHFRP42898 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MTHFRP42898 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTHFRP42898 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTHFRP42898 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.6■□□□□ 0.57
MTHFRP42898 SIGLEC16-201ENST00000599858 1437 ntBASIC18.6■□□□□ 0.57
MTHFRP42898 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTHFRP42898 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTHFRP42898 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms