Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC6A4P31645 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC6A4P31645 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC6A4P31645 TP73-AS1-207ENST00000624167 988 ntBASIC18.3■□□□□ 0.52
SLC6A4P31645 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SLC6A4P31645 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC6A4P31645 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC6A4P31645 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC6A4P31645 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A4P31645 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC6A4P31645 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC6A4P31645 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC6A4P31645 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC6A4P31645 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A4P31645 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC6A4P31645 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A4P31645 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC6A4P31645 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC6A4P31645 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC6A4P31645 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC6A4P31645 AL160237.2-201ENST00000556165 472 ntBASIC18.29■□□□□ 0.52
SLC6A4P31645 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A4P31645 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC6A4P31645 AC008608.2-201ENST00000606089 416 ntBASIC18.29■□□□□ 0.52
SLC6A4P31645 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SLC6A4P31645 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC6A4P31645 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A4P31645 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SLC6A4P31645 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A4P31645 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A4P31645 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC6A4P31645 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SLC6A4P31645 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A4P31645 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A4P31645 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
SLC6A4P31645 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A4P31645 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A4P31645 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC6A4P31645 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.28■□□□□ 0.52
SLC6A4P31645 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC6A4P31645 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC6A4P31645 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
SLC6A4P31645 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC6A4P31645 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC6A4P31645 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC6A4P31645 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 COX5BP2-201ENST00000392354 334 ntBASIC18.28■□□□□ 0.52
SLC6A4P31645 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
SLC6A4P31645 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC6A4P31645 ABCD1P5-201ENST00000445663 754 ntBASIC18.28■□□□□ 0.52
SLC6A4P31645 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC6A4P31645 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC6A4P31645 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.28■□□□□ 0.52
SLC6A4P31645 AC106795.1-205ENST00000512851 1056 ntBASIC18.28■□□□□ 0.52
SLC6A4P31645 AP002469.2-201ENST00000531724 424 ntBASIC18.28■□□□□ 0.52
SLC6A4P31645 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC6A4P31645 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC6A4P31645 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC6A4P31645 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SLC6A4P31645 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SLC6A4P31645 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC6A4P31645 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A4P31645 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SLC6A4P31645 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A4P31645 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SLC6A4P31645 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A4P31645 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A4P31645 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A4P31645 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
SLC6A4P31645 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC6A4P31645 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SLC6A4P31645 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC6A4P31645 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SLC6A4P31645 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A4P31645 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC6A4P31645 KRT8P10-201ENST00000450021 1447 ntBASIC18.27■□□□□ 0.52
SLC6A4P31645 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
SLC6A4P31645 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A4P31645 AP005117.1-201ENST00000584346 1413 ntBASIC18.27■□□□□ 0.52
SLC6A4P31645 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms