Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTR1BP28222 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTR1BP28222 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTR1BP28222 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTR1BP28222 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HTR1BP28222 BICD1-207ENST00000551848 1962 ntBASIC17.79■□□□□ 0.44
HTR1BP28222 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HTR1BP28222 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HTR1BP28222 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
HTR1BP28222 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTR1BP28222 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HTR1BP28222 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.78■□□□□ 0.44
HTR1BP28222 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.78■□□□□ 0.44
HTR1BP28222 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.78■□□□□ 0.44
HTR1BP28222 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HTR1BP28222 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.78■□□□□ 0.44
HTR1BP28222 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HTR1BP28222 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.78■□□□□ 0.44
HTR1BP28222 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.78■□□□□ 0.44
HTR1BP28222 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.78■□□□□ 0.44
HTR1BP28222 AC009533.2-201ENST00000543664 586 ntBASIC17.78■□□□□ 0.44
HTR1BP28222 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.78■□□□□ 0.44
HTR1BP28222 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.78■□□□□ 0.44
HTR1BP28222 BNIP3P18-201ENST00000593976 575 ntBASIC17.78■□□□□ 0.44
HTR1BP28222 AC114341.1-201ENST00000618070 349 ntBASIC17.78■□□□□ 0.44
HTR1BP28222 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.78■□□□□ 0.44
HTR1BP28222 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.78■□□□□ 0.44
HTR1BP28222 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
HTR1BP28222 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.78■□□□□ 0.44
HTR1BP28222 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.78■□□□□ 0.44
HTR1BP28222 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.78■□□□□ 0.44
HTR1BP28222 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1BP28222 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1BP28222 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1BP28222 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HTR1BP28222 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1BP28222 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1BP28222 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1BP28222 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.77■□□□□ 0.44
HTR1BP28222 WIZP1-201ENST00000531444 2299 ntBASIC17.77■□□□□ 0.44
HTR1BP28222 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1BP28222 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.77■□□□□ 0.44
HTR1BP28222 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1BP28222 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.77■□□□□ 0.44
HTR1BP28222 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1BP28222 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1BP28222 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.77■□□□□ 0.44
HTR1BP28222 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.77■□□□□ 0.44
HTR1BP28222 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.77■□□□□ 0.44
HTR1BP28222 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
HTR1BP28222 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.77■□□□□ 0.44
HTR1BP28222 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.77■□□□□ 0.44
HTR1BP28222 MIR5100-201ENST00000579544 119 ntBASIC17.77■□□□□ 0.44
HTR1BP28222 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HTR1BP28222 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1BP28222 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1BP28222 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1BP28222 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HTR1BP28222 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
HTR1BP28222 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
HTR1BP28222 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.77■□□□□ 0.43
HTR1BP28222 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1BP28222 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.76■□□□□ 0.43
HTR1BP28222 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1BP28222 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1BP28222 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1BP28222 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HTR1BP28222 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HTR1BP28222 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1BP28222 KRT8P10-201ENST00000450021 1447 ntBASIC17.76■□□□□ 0.43
HTR1BP28222 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1BP28222 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.76■□□□□ 0.43
HTR1BP28222 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1BP28222 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1BP28222 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1BP28222 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.76■□□□□ 0.43
HTR1BP28222 SAPCD2P3-201ENST00000455031 850 ntBASIC17.76■□□□□ 0.43
HTR1BP28222 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.76■□□□□ 0.43
HTR1BP28222 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.76■□□□□ 0.43
HTR1BP28222 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.76■□□□□ 0.43
HTR1BP28222 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms