Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
PTPN3P26045 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN3P26045 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN3P26045 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN3P26045 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN3P26045 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN3P26045 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.21■□□□□ 0.51
PTPN3P26045 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN3P26045 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN3P26045 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
PTPN3P26045 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.2■□□□□ 0.5
PTPN3P26045 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN3P26045 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.2■□□□□ 0.5
PTPN3P26045 DDX43P3-201ENST00000441064 443 ntBASIC18.2■□□□□ 0.5
PTPN3P26045 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN3P26045 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.2■□□□□ 0.5
PTPN3P26045 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.2■□□□□ 0.5
PTPN3P26045 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN3P26045 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN3P26045 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PTPN3P26045 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN3P26045 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
PTPN3P26045 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN3P26045 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTPN3P26045 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN3P26045 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN3P26045 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.19■□□□□ 0.5
PTPN3P26045 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN3P26045 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN3P26045 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN3P26045 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN3P26045 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN3P26045 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
PTPN3P26045 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.19■□□□□ 0.5
PTPN3P26045 TSPY22P-201ENST00000427496 604 ntBASIC18.19■□□□□ 0.5
PTPN3P26045 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.19■□□□□ 0.5
PTPN3P26045 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.19■□□□□ 0.5
PTPN3P26045 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
PTPN3P26045 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN3P26045 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.19■□□□□ 0.5
PTPN3P26045 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN3P26045 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PTPN3P26045 AL121956.5-201ENST00000625261 221 ntBASIC18.19■□□□□ 0.5
PTPN3P26045 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN3P26045 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN3P26045 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN3P26045 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN3P26045 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTPN3P26045 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.19■□□□□ 0.5
PTPN3P26045 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN3P26045 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PTPN3P26045 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.18■□□□□ 0.5
PTPN3P26045 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.18■□□□□ 0.5
PTPN3P26045 LINC00304-203ENST00000565008 1864 ntBASIC18.18■□□□□ 0.5
PTPN3P26045 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PTPN3P26045 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PTPN3P26045 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN3P26045 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.18■□□□□ 0.5
PTPN3P26045 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN3P26045 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN3P26045 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN3P26045 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN3P26045 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN3P26045 REXO1L11P-201ENST00000620964 1927 ntBASIC18.18■□□□□ 0.5
PTPN3P26045 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN3P26045 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.18■□□□□ 0.5
PTPN3P26045 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PTPN3P26045 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.18■□□□□ 0.5
PTPN3P26045 AC011498.5-201ENST00000592027 486 ntBASIC18.18■□□□□ 0.5
PTPN3P26045 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms