Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NFKB1P19838 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.17■□□□□ 0.5
NFKB1P19838 MTCL1P1-201ENST00000446207 792 ntBASIC18.17■□□□□ 0.5
NFKB1P19838 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 AC068472.1-201ENST00000474589 881 ntBASIC18.17■□□□□ 0.5
NFKB1P19838 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.17■□□□□ 0.5
NFKB1P19838 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.17■□□□□ 0.5
NFKB1P19838 AL136038.3-201ENST00000561909 1096 ntBASIC18.17■□□□□ 0.5
NFKB1P19838 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.17■□□□□ 0.5
NFKB1P19838 AC116407.2-201ENST00000613639 860 ntBASIC18.17■□□□□ 0.5
NFKB1P19838 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.17■□□□□ 0.5
NFKB1P19838 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.17■□□□□ 0.5
NFKB1P19838 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.17■□□□□ 0.5
NFKB1P19838 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NFKB1P19838 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.17■□□□□ 0.5
NFKB1P19838 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NFKB1P19838 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.17■□□□□ 0.5
NFKB1P19838 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.16■□□□□ 0.5
NFKB1P19838 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKB1P19838 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
NFKB1P19838 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NFKB1P19838 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NFKB1P19838 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.16■□□□□ 0.5
NFKB1P19838 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKB1P19838 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKB1P19838 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.16■□□□□ 0.5
NFKB1P19838 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.16■□□□□ 0.5
NFKB1P19838 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.16■□□□□ 0.5
NFKB1P19838 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKB1P19838 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.16■□□□□ 0.5
NFKB1P19838 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKB1P19838 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKB1P19838 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NFKB1P19838 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.16■□□□□ 0.5
NFKB1P19838 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKB1P19838 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKB1P19838 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKB1P19838 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.15■□□□□ 0.5
NFKB1P19838 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKB1P19838 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKB1P19838 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKB1P19838 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.15■□□□□ 0.5
NFKB1P19838 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKB1P19838 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKB1P19838 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKB1P19838 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKB1P19838 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.15■□□□□ 0.5
NFKB1P19838 TSPY22P-201ENST00000427496 604 ntBASIC18.15■□□□□ 0.5
NFKB1P19838 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKB1P19838 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.15■□□□□ 0.5
NFKB1P19838 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
NFKB1P19838 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.15■□□□□ 0.5
NFKB1P19838 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.15■□□□□ 0.5
NFKB1P19838 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.15■□□□□ 0.5
NFKB1P19838 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKB1P19838 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKB1P19838 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NFKB1P19838 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKB1P19838 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKB1P19838 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKB1P19838 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NFKB1P19838 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NFKB1P19838 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
NFKB1P19838 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.5
NFKB1P19838 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NFKB1P19838 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
NFKB1P19838 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKB1P19838 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.14■□□□□ 0.49
NFKB1P19838 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NFKB1P19838 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
NFKB1P19838 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
NFKB1P19838 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.14■□□□□ 0.49
NFKB1P19838 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NFKB1P19838 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NFKB1P19838 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKB1P19838 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.14■□□□□ 0.49
NFKB1P19838 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.14■□□□□ 0.49
NFKB1P19838 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.14■□□□□ 0.49
NFKB1P19838 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NFKB1P19838 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.14■□□□□ 0.49
NFKB1P19838 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.14■□□□□ 0.49
NFKB1P19838 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
NFKB1P19838 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.14■□□□□ 0.49
NFKB1P19838 AL121956.5-201ENST00000625261 221 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms