Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.81■□□□□ 0.44
XRCC1P18887 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
XRCC1P18887 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 SDHAP2-201ENST00000455183 2001 ntBASIC17.81■□□□□ 0.44
XRCC1P18887 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
XRCC1P18887 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
XRCC1P18887 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.81■□□□□ 0.44
XRCC1P18887 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.81■□□□□ 0.44
XRCC1P18887 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.81■□□□□ 0.44
XRCC1P18887 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.81■□□□□ 0.44
XRCC1P18887 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
XRCC1P18887 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.81■□□□□ 0.44
XRCC1P18887 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.81■□□□□ 0.44
XRCC1P18887 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
XRCC1P18887 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.81■□□□□ 0.44
XRCC1P18887 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC1P18887 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
XRCC1P18887 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
XRCC1P18887 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
XRCC1P18887 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.8■□□□□ 0.44
XRCC1P18887 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.8■□□□□ 0.44
XRCC1P18887 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.8■□□□□ 0.44
XRCC1P18887 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
XRCC1P18887 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.8■□□□□ 0.44
XRCC1P18887 AP002383.4-201ENST00000442518 975 ntBASIC17.8■□□□□ 0.44
XRCC1P18887 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.8■□□□□ 0.44
XRCC1P18887 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.8■□□□□ 0.44
XRCC1P18887 MIR3180-1-201ENST00000580374 94 ntBASIC17.8■□□□□ 0.44
XRCC1P18887 MIR3180-3-201ENST00000584616 94 ntBASIC17.8■□□□□ 0.44
XRCC1P18887 AC092329.2-201ENST00000598402 547 ntBASIC17.8■□□□□ 0.44
XRCC1P18887 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
XRCC1P18887 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.8■□□□□ 0.44
XRCC1P18887 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
XRCC1P18887 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.8■□□□□ 0.44
XRCC1P18887 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
XRCC1P18887 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.8■□□□□ 0.44
XRCC1P18887 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC1P18887 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.79■□□□□ 0.44
XRCC1P18887 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
XRCC1P18887 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.79■□□□□ 0.44
XRCC1P18887 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.79■□□□□ 0.44
XRCC1P18887 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
XRCC1P18887 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
XRCC1P18887 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.79■□□□□ 0.44
XRCC1P18887 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.79■□□□□ 0.44
XRCC1P18887 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.79■□□□□ 0.44
XRCC1P18887 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms