Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
APOC3P02656 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.37□□□□□ -0.11
APOC3P02656 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
APOC3P02656 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
APOC3P02656 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
APOC3P02656 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
APOC3P02656 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.37□□□□□ -0.11
APOC3P02656 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
APOC3P02656 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
APOC3P02656 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 C8orf49-201ENST00000525043 1968 ntBASIC14.36□□□□□ -0.11
APOC3P02656 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.36□□□□□ -0.11
APOC3P02656 KRT18P55-202ENST00000578578 1546 ntBASIC14.36□□□□□ -0.11
APOC3P02656 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.36□□□□□ -0.11
APOC3P02656 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.36□□□□□ -0.11
APOC3P02656 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.36□□□□□ -0.11
APOC3P02656 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.36□□□□□ -0.11
APOC3P02656 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.36□□□□□ -0.11
APOC3P02656 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
APOC3P02656 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
APOC3P02656 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.36□□□□□ -0.11
APOC3P02656 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
APOC3P02656 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 AC093010.1-201ENST00000473625 1624 ntBASIC14.36□□□□□ -0.11
APOC3P02656 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
APOC3P02656 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
APOC3P02656 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC3P02656 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
APOC3P02656 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC3P02656 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
APOC3P02656 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
APOC3P02656 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
APOC3P02656 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC3P02656 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
APOC3P02656 AC116351.2-201ENST00000606540 1585 ntBASIC14.35□□□□□ -0.11
APOC3P02656 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
APOC3P02656 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
APOC3P02656 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.35□□□□□ -0.11
APOC3P02656 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
APOC3P02656 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
APOC3P02656 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC3P02656 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
APOC3P02656 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 AC005915.1-201ENST00000624912 2018 ntBASIC14.35□□□□□ -0.11
APOC3P02656 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC3P02656 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC3P02656 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC3P02656 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms