Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-AP01891 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HLA-AP01891 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-AP01891 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-AP01891 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-AP01891 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-AP01891 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-AP01891 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
HLA-AP01891 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-AP01891 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-AP01891 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HLA-AP01891 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HLA-AP01891 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HLA-AP01891 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
HLA-AP01891 KRT18P29-201ENST00000397031 1267 ntBASIC15.1■□□□□ 0.01
HLA-AP01891 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-AP01891 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.1■□□□□ 0.01
HLA-AP01891 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-AP01891 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
HLA-AP01891 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
HLA-AP01891 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HLA-AP01891 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 AC105020.1-201ENST00000435356 2205 ntBASIC15.1■□□□□ 0.01
HLA-AP01891 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 AL162727.3-201ENST00000635661 2787 ntBASIC15.1■□□□□ 0.01
HLA-AP01891 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HLA-AP01891 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-AP01891 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.1■□□□□ 0.01
HLA-AP01891 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
HLA-AP01891 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-AP01891 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HLA-AP01891 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-AP01891 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-AP01891 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
HLA-AP01891 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
HLA-AP01891 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-AP01891 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HLA-AP01891 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-AP01891 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.09■□□□□ 0.01
HLA-AP01891 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HLA-AP01891 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.09■□□□□ 0.01
HLA-AP01891 AC239809.2-201ENST00000415381 517 ntBASIC15.09■□□□□ 0.01
HLA-AP01891 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.09■□□□□ 0.01
HLA-AP01891 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.09■□□□□ 0.01
HLA-AP01891 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-AP01891 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HLA-AP01891 DOC2GP-204ENST00000639052 2548 ntBASIC15.09■□□□□ 0.01
HLA-AP01891 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HLA-AP01891 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-AP01891 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
HLA-AP01891 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-AP01891 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.08■□□□□ 0.01
HLA-AP01891 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-AP01891 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-AP01891 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-AP01891 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
HLA-AP01891 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.08■□□□□ 0
HLA-AP01891 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-AP01891 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-AP01891 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.08■□□□□ 0
HLA-AP01891 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.08■□□□□ 0
HLA-AP01891 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-AP01891 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-AP01891 KRASP1-201ENST00000407852 552 ntBASIC15.08■□□□□ 0
HLA-AP01891 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.08■□□□□ 0
HLA-AP01891 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.08■□□□□ 0
HLA-AP01891 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms