Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLPTM1O96005 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLPTM1O96005 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.9■□□□□ 0.3
CLPTM1O96005 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLPTM1O96005 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLPTM1O96005 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLPTM1O96005 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLPTM1O96005 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLPTM1O96005 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLPTM1O96005 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLPTM1O96005 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLPTM1O96005 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.89■□□□□ 0.3
CLPTM1O96005 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CLPTM1O96005 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CLPTM1O96005 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLPTM1O96005 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLPTM1O96005 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLPTM1O96005 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLPTM1O96005 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CLPTM1O96005 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.89■□□□□ 0.29
CLPTM1O96005 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLPTM1O96005 UBE2SP1-201ENST00000450587 669 ntBASIC16.89■□□□□ 0.29
CLPTM1O96005 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.89■□□□□ 0.29
CLPTM1O96005 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.89■□□□□ 0.29
CLPTM1O96005 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.89■□□□□ 0.29
CLPTM1O96005 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLPTM1O96005 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLPTM1O96005 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.89■□□□□ 0.29
CLPTM1O96005 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CLPTM1O96005 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLPTM1O96005 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLPTM1O96005 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.89■□□□□ 0.29
CLPTM1O96005 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLPTM1O96005 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLPTM1O96005 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLPTM1O96005 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CLPTM1O96005 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.89■□□□□ 0.29
CLPTM1O96005 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLPTM1O96005 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CLPTM1O96005 KRT8P45-201ENST00000414328 1447 ntBASIC16.88■□□□□ 0.29
CLPTM1O96005 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.88■□□□□ 0.29
CLPTM1O96005 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.88■□□□□ 0.29
CLPTM1O96005 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.88■□□□□ 0.29
CLPTM1O96005 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLPTM1O96005 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLPTM1O96005 AP006587.1-201ENST00000534129 1502 ntBASIC16.88■□□□□ 0.29
CLPTM1O96005 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.88■□□□□ 0.29
CLPTM1O96005 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.88■□□□□ 0.29
CLPTM1O96005 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CLPTM1O96005 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.88■□□□□ 0.29
CLPTM1O96005 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.88■□□□□ 0.29
CLPTM1O96005 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.88■□□□□ 0.29
CLPTM1O96005 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.88■□□□□ 0.29
CLPTM1O96005 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLPTM1O96005 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLPTM1O96005 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.87■□□□□ 0.29
CLPTM1O96005 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.87■□□□□ 0.29
CLPTM1O96005 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.87■□□□□ 0.29
CLPTM1O96005 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLPTM1O96005 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CLPTM1O96005 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.87■□□□□ 0.29
CLPTM1O96005 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.87■□□□□ 0.29
CLPTM1O96005 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 RCC2P6-201ENST00000526625 1557 ntBASIC16.87■□□□□ 0.29
CLPTM1O96005 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.87■□□□□ 0.29
CLPTM1O96005 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CLPTM1O96005 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.87■□□□□ 0.29
CLPTM1O96005 TSPY21P-201ENST00000433481 731 ntBASIC16.87■□□□□ 0.29
CLPTM1O96005 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CLPTM1O96005 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLPTM1O96005 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms