Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
VAPBO95292 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.96■□□□□ 0.47
VAPBO95292 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 KRT18P65-201ENST00000439811 1286 ntBASIC17.96■□□□□ 0.47
VAPBO95292 AL359075.1-203ENST00000462729 1002 ntBASIC17.96■□□□□ 0.47
VAPBO95292 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.96■□□□□ 0.47
VAPBO95292 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.96■□□□□ 0.47
VAPBO95292 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
VAPBO95292 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
VAPBO95292 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VAPBO95292 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
VAPBO95292 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
VAPBO95292 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
VAPBO95292 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.95■□□□□ 0.46
VAPBO95292 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VAPBO95292 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
VAPBO95292 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.95■□□□□ 0.46
VAPBO95292 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VAPBO95292 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 HOMER2P1-201ENST00000455653 964 ntBASIC17.95■□□□□ 0.46
VAPBO95292 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.95■□□□□ 0.46
VAPBO95292 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
VAPBO95292 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.95■□□□□ 0.46
VAPBO95292 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.95■□□□□ 0.46
VAPBO95292 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VAPBO95292 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.95■□□□□ 0.46
VAPBO95292 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
VAPBO95292 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.95■□□□□ 0.46
VAPBO95292 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.95■□□□□ 0.46
VAPBO95292 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VAPBO95292 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
VAPBO95292 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
VAPBO95292 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.94■□□□□ 0.46
VAPBO95292 AC009949.1-201ENST00000623048 1830 ntBASIC17.94■□□□□ 0.46
VAPBO95292 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VAPBO95292 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VAPBO95292 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
VAPBO95292 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.94■□□□□ 0.46
VAPBO95292 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.94■□□□□ 0.46
VAPBO95292 ZNF444P1-201ENST00000559497 298 ntBASIC17.94■□□□□ 0.46
VAPBO95292 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.94■□□□□ 0.46
VAPBO95292 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.94■□□□□ 0.46
VAPBO95292 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.94■□□□□ 0.46
VAPBO95292 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VAPBO95292 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.94■□□□□ 0.46
VAPBO95292 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
VAPBO95292 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VAPBO95292 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VAPBO95292 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VAPBO95292 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VAPBO95292 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VAPBO95292 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
VAPBO95292 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.94■□□□□ 0.46
VAPBO95292 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VAPBO95292 PP12613-201ENST00000424958 2230 ntBASIC17.94■□□□□ 0.46
VAPBO95292 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.94■□□□□ 0.46
VAPBO95292 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VAPBO95292 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
VAPBO95292 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.93■□□□□ 0.46
VAPBO95292 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 HBZP1-201ENST00000354915 429 ntBASIC17.93■□□□□ 0.46
VAPBO95292 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms