Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNX4O95219 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNX4O95219 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX4O95219 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX4O95219 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SNX4O95219 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SNX4O95219 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SNX4O95219 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SNX4O95219 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX4O95219 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX4O95219 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SNX4O95219 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 IER3-202ENST00000376377 1350 ntBASIC16.81■□□□□ 0.28
SNX4O95219 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX4O95219 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 AC005332.1-201ENST00000577698 1310 ntBASIC16.81■□□□□ 0.28
SNX4O95219 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 AC084018.2-201ENST00000613093 2607 ntBASIC16.81■□□□□ 0.28
SNX4O95219 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX4O95219 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 MIR149-201ENST00000384879 89 ntBASIC16.81■□□□□ 0.28
SNX4O95219 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.81■□□□□ 0.28
SNX4O95219 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.81■□□□□ 0.28
SNX4O95219 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.81■□□□□ 0.28
SNX4O95219 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX4O95219 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.8■□□□□ 0.28
SNX4O95219 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.8■□□□□ 0.28
SNX4O95219 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SNX4O95219 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SNX4O95219 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SNX4O95219 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SNX4O95219 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SNX4O95219 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 SLC25A6P5-201ENST00000435663 894 ntBASIC16.8■□□□□ 0.28
SNX4O95219 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.8■□□□□ 0.28
SNX4O95219 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.8■□□□□ 0.28
SNX4O95219 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.8■□□□□ 0.28
SNX4O95219 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SNX4O95219 AC012317.2-201ENST00000623305 2251 ntBASIC16.8■□□□□ 0.28
SNX4O95219 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 AC134043.2-201ENST00000624206 2238 ntBASIC16.8■□□□□ 0.28
SNX4O95219 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.8■□□□□ 0.28
SNX4O95219 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 AC009102.3-201ENST00000623118 1491 ntBASIC16.8■□□□□ 0.28
SNX4O95219 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX4O95219 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
SNX4O95219 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.79■□□□□ 0.28
SNX4O95219 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 ANO7L1-203ENST00000602586 1720 ntBASIC16.79■□□□□ 0.28
SNX4O95219 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.79■□□□□ 0.28
SNX4O95219 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SNX4O95219 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.79■□□□□ 0.28
SNX4O95219 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms