Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.95□□□□□ -0.18
ZNF253O75346 MIR3180-5-201ENST00000583743 153 ntBASIC13.95□□□□□ -0.18
ZNF253O75346 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ZNF253O75346 KRT8P7-201ENST00000533003 1432 ntBASIC13.95□□□□□ -0.18
ZNF253O75346 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.95□□□□□ -0.18
ZNF253O75346 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ZNF253O75346 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 AC063926.3-201ENST00000624734 5658 ntBASIC13.95□□□□□ -0.18
ZNF253O75346 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.94□□□□□ -0.18
ZNF253O75346 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ZNF253O75346 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ZNF253O75346 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
ZNF253O75346 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.94□□□□□ -0.18
ZNF253O75346 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.94□□□□□ -0.18
ZNF253O75346 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.94□□□□□ -0.18
ZNF253O75346 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 MESTP1-201ENST00000404287 994 ntBASIC13.94□□□□□ -0.18
ZNF253O75346 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.94□□□□□ -0.18
ZNF253O75346 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.94□□□□□ -0.18
ZNF253O75346 AC128676.1-201ENST00000454392 318 ntBASIC13.94□□□□□ -0.18
ZNF253O75346 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.94□□□□□ -0.18
ZNF253O75346 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.94□□□□□ -0.18
ZNF253O75346 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ZNF253O75346 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.94□□□□□ -0.18
ZNF253O75346 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
ZNF253O75346 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.94□□□□□ -0.18
ZNF253O75346 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.94□□□□□ -0.18
ZNF253O75346 GPAT2P1-201ENST00000444924 1672 ntBASIC13.94□□□□□ -0.18
ZNF253O75346 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ZNF253O75346 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.94□□□□□ -0.18
ZNF253O75346 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.94□□□□□ -0.18
ZNF253O75346 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF253O75346 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.93□□□□□ -0.18
ZNF253O75346 LINC01126-201ENST00000623515 1646 ntBASIC13.93□□□□□ -0.18
ZNF253O75346 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.93□□□□□ -0.18
ZNF253O75346 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ZNF253O75346 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
ZNF253O75346 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.93□□□□□ -0.18
ZNF253O75346 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.93□□□□□ -0.18
ZNF253O75346 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.93□□□□□ -0.18
ZNF253O75346 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.93□□□□□ -0.18
ZNF253O75346 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ZNF253O75346 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ZNF253O75346 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.93□□□□□ -0.18
ZNF253O75346 RPPH1-201ENST00000516869 333 ntBASIC13.93□□□□□ -0.18
ZNF253O75346 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
ZNF253O75346 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 AC009065.1-201ENST00000564055 1225 ntBASIC13.93□□□□□ -0.18
ZNF253O75346 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.93□□□□□ -0.18
ZNF253O75346 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.93□□□□□ -0.18
ZNF253O75346 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.93□□□□□ -0.18
ZNF253O75346 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.93□□□□□ -0.18
ZNF253O75346 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.93□□□□□ -0.18
ZNF253O75346 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.93□□□□□ -0.18
ZNF253O75346 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.93□□□□□ -0.18
ZNF253O75346 AC009102.3-201ENST00000623118 1491 ntBASIC13.93□□□□□ -0.18
ZNF253O75346 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
ZNF253O75346 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
ZNF253O75346 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
ZNF253O75346 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF253O75346 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms