Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCN1O60741 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.71■□□□□ 0.27
HCN1O60741 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCN1O60741 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCN1O60741 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HCN1O60741 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HCN1O60741 PVRIG2P-201ENST00000435460 978 ntBASIC16.71■□□□□ 0.27
HCN1O60741 HCG4P8-203ENST00000443049 980 ntBASIC16.71■□□□□ 0.27
HCN1O60741 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
HCN1O60741 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
HCN1O60741 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HCN1O60741 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.71■□□□□ 0.27
HCN1O60741 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCN1O60741 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HCN1O60741 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
HCN1O60741 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCN1O60741 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCN1O60741 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCN1O60741 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.71■□□□□ 0.27
HCN1O60741 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HCN1O60741 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
HCN1O60741 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HCN1O60741 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.7■□□□□ 0.26
HCN1O60741 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.7■□□□□ 0.26
HCN1O60741 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.7■□□□□ 0.26
HCN1O60741 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.7■□□□□ 0.26
HCN1O60741 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 BX276092.5-203ENST00000456199 560 ntBASIC16.7■□□□□ 0.26
HCN1O60741 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.7■□□□□ 0.26
HCN1O60741 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.7■□□□□ 0.26
HCN1O60741 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.7■□□□□ 0.26
HCN1O60741 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.7■□□□□ 0.26
HCN1O60741 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
HCN1O60741 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
HCN1O60741 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
HCN1O60741 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HCN1O60741 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HCN1O60741 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HCN1O60741 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.7■□□□□ 0.26
HCN1O60741 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HCN1O60741 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.7■□□□□ 0.26
HCN1O60741 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HCN1O60741 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCN1O60741 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HCN1O60741 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HCN1O60741 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 GMCL1P1-201ENST00000463439 1581 ntBASIC16.69■□□□□ 0.26
HCN1O60741 REXO1L9P-201ENST00000604264 2108 ntBASIC16.69■□□□□ 0.26
HCN1O60741 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
HCN1O60741 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
HCN1O60741 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HCN1O60741 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.69■□□□□ 0.26
HCN1O60741 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.69■□□□□ 0.26
HCN1O60741 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.69■□□□□ 0.26
HCN1O60741 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HCN1O60741 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.69■□□□□ 0.26
HCN1O60741 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HCN1O60741 AC099398.1-201ENST00000567919 2776 ntBASIC16.69■□□□□ 0.26
HCN1O60741 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HCN1O60741 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HCN1O60741 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.69■□□□□ 0.26
HCN1O60741 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.69■□□□□ 0.26
HCN1O60741 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
HCN1O60741 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCN1O60741 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
HCN1O60741 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms