Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCDH7O60245 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PCDH7O60245 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH7O60245 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
PCDH7O60245 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH7O60245 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH7O60245 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDH7O60245 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH7O60245 AL355312.1-201ENST00000407115 2176 ntBASIC17.08■□□□□ 0.32
PCDH7O60245 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDH7O60245 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH7O60245 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH7O60245 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDH7O60245 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH7O60245 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH7O60245 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH7O60245 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH7O60245 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PCDH7O60245 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH7O60245 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDH7O60245 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH7O60245 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH7O60245 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH7O60245 AC092647.4-201ENST00000457211 535 ntBASIC17.07■□□□□ 0.32
PCDH7O60245 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH7O60245 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH7O60245 ZNF444P1-201ENST00000559497 298 ntBASIC17.07■□□□□ 0.32
PCDH7O60245 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH7O60245 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDH7O60245 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.07■□□□□ 0.32
PCDH7O60245 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH7O60245 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PCDH7O60245 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH7O60245 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH7O60245 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH7O60245 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PCDH7O60245 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH7O60245 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH7O60245 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH7O60245 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH7O60245 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH7O60245 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDH7O60245 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PCDH7O60245 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PCDH7O60245 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCDH7O60245 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 TSPY12P-201ENST00000421279 868 ntBASIC17.06■□□□□ 0.32
PCDH7O60245 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDH7O60245 AP003733.1-201ENST00000491725 852 ntBASIC17.06■□□□□ 0.32
PCDH7O60245 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
PCDH7O60245 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH7O60245 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 AC020916.1-201ENST00000587762 1774 ntBASIC17.06■□□□□ 0.32
PCDH7O60245 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH7O60245 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH7O60245 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.06■□□□□ 0.32
PCDH7O60245 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PCDH7O60245 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH7O60245 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH7O60245 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH7O60245 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH7O60245 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH7O60245 AC009949.1-201ENST00000623048 1830 ntBASIC17.05■□□□□ 0.32
PCDH7O60245 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH7O60245 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH7O60245 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH7O60245 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH7O60245 HBZP1-201ENST00000354915 429 ntBASIC17.05■□□□□ 0.32
PCDH7O60245 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH7O60245 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH7O60245 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCDH7O60245 AC112907.2-201ENST00000448639 330 ntBASIC17.05■□□□□ 0.32
PCDH7O60245 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH7O60245 AC009154.2-201ENST00000621177 724 ntBASIC17.05■□□□□ 0.32
PCDH7O60245 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH7O60245 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH7O60245 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH7O60245 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH7O60245 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PCDH7O60245 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms