Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.08■□□□□ 0.81
CHMP2AO43633 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.08■□□□□ 0.81
CHMP2AO43633 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP2AO43633 AC111152.3-201ENST00000569699 673 ntBASIC20.08■□□□□ 0.81
CHMP2AO43633 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.08■□□□□ 0.81
CHMP2AO43633 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.08■□□□□ 0.81
CHMP2AO43633 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP2AO43633 AC138028.4-201ENST00000564984 1845 ntBASIC20.08■□□□□ 0.8
CHMP2AO43633 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHMP2AO43633 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CHMP2AO43633 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHMP2AO43633 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CHMP2AO43633 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CHMP2AO43633 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.08■□□□□ 0.8
CHMP2AO43633 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CHMP2AO43633 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMP2AO43633 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CHMP2AO43633 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.07■□□□□ 0.8
CHMP2AO43633 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CHMP2AO43633 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMP2AO43633 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMP2AO43633 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMP2AO43633 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.07■□□□□ 0.8
CHMP2AO43633 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.07■□□□□ 0.8
CHMP2AO43633 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 RCN1P2-201ENST00000398357 915 ntBASIC20.07■□□□□ 0.8
CHMP2AO43633 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CHMP2AO43633 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.07■□□□□ 0.8
CHMP2AO43633 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.07■□□□□ 0.8
CHMP2AO43633 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.07■□□□□ 0.8
CHMP2AO43633 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMP2AO43633 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.07■□□□□ 0.8
CHMP2AO43633 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP2AO43633 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CHMP2AO43633 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP2AO43633 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMP2AO43633 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CHMP2AO43633 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP2AO43633 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMP2AO43633 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.06■□□□□ 0.8
CHMP2AO43633 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP2AO43633 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.06■□□□□ 0.8
CHMP2AO43633 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.06■□□□□ 0.8
CHMP2AO43633 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMP2AO43633 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP2AO43633 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.06■□□□□ 0.8
CHMP2AO43633 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CHMP2AO43633 AC114341.1-201ENST00000618070 349 ntBASIC20.06■□□□□ 0.8
CHMP2AO43633 AL691432.3-201ENST00000621860 400 ntBASIC20.06■□□□□ 0.8
CHMP2AO43633 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP2AO43633 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.06■□□□□ 0.8
CHMP2AO43633 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CHMP2AO43633 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 FLJ13224-201ENST00000313737 1514 ntBASIC20.06■□□□□ 0.8
CHMP2AO43633 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMP2AO43633 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP2AO43633 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.05■□□□□ 0.8
CHMP2AO43633 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CHMP2AO43633 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms