Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 LINC00896-202ENST00000609602 2128 ntBASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 AL161938.1-201ENST00000569833 2180 ntBASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBAL3A6NHL2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 AC073592.3-201ENST00000625118 1834 ntBASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 PCDHA12-202ENST00000613593 2588 ntBASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 AC046158.3-201ENST00000624947 2558 ntBASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBAL3A6NHL2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 AC009078.2-202ENST00000463353 338 ntBASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 AL592071.1-201ENST00000611956 408 ntBASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBAL3A6NHL2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBAL3A6NHL2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TUBAL3A6NHL2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TUBAL3A6NHL2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBAL3A6NHL2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBAL3A6NHL2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms