Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC163A0A0D9SF12 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 AP002414.1-201ENST00000391405 1147 ntBASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 TSEN15P1-201ENST00000423257 515 ntBASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 DDX43P3-201ENST00000441064 443 ntBASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 AC106028.4-201ENST00000614509 607 ntBASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 AC093010.1-201ENST00000473625 1624 ntBASIC17.58■□□□□ 0.4
CCDC163A0A0D9SF12 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 PCDHAC2-203ENST00000615316 3011 ntBASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 KRT19P2-202ENST00000557173 1012 ntBASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 AC007064.4-201ENST00000637740 555 ntBASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 AC148477.5-201ENST00000625164 1645 ntBASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC163A0A0D9SF12 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 AC074386.1-202ENST00000463561 864 ntBASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 AL096865.1-201ENST00000606796 927 ntBASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 AC010507.1-201ENST00000633895 436 ntBASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC163A0A0D9SF12 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms